Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 AC005829.2-201ENST00000571422 1056 ntBASIC21.02■□□□□ 0.96
TTC16Q8NEE8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 AC027702.1-201ENST00000563810 1770 ntBASIC21.02■□□□□ 0.96
TTC16Q8NEE8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
TTC16Q8NEE8 AL137060.1-201ENST00000618151 2648 ntBASIC21.02■□□□□ 0.96
TTC16Q8NEE8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TTC16Q8NEE8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.02■□□□□ 0.95
TTC16Q8NEE8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.01■□□□□ 0.95
TTC16Q8NEE8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC16Q8NEE8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TTC16Q8NEE8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TTC16Q8NEE8 AC239809.2-201ENST00000415381 517 ntBASIC21■□□□□ 0.95
TTC16Q8NEE8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TTC16Q8NEE8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TTC16Q8NEE8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TTC16Q8NEE8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 AC120498.8-201ENST00000614275 531 ntBASIC21■□□□□ 0.95
TTC16Q8NEE8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
TTC16Q8NEE8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21■□□□□ 0.95
TTC16Q8NEE8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TTC16Q8NEE8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC16Q8NEE8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TTC16Q8NEE8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TTC16Q8NEE8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 KRASP1-201ENST00000407852 552 ntBASIC20.98■□□□□ 0.95
TTC16Q8NEE8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC16Q8NEE8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms