Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TTC39CQ8N584 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39CQ8N584 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39CQ8N584 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.3■■□□□ 1
TTC39CQ8N584 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39CQ8N584 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TTC39CQ8N584 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.3■■□□□ 1
TTC39CQ8N584 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.3■■□□□ 1
TTC39CQ8N584 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.3■■□□□ 1
TTC39CQ8N584 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.3■■□□□ 1
TTC39CQ8N584 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
TTC39CQ8N584 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39CQ8N584 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39CQ8N584 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39CQ8N584 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.3■■□□□ 1
TTC39CQ8N584 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.29■■□□□ 1
TTC39CQ8N584 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.29■■□□□ 1
TTC39CQ8N584 UNC93B4-201ENST00000505679 747 ntBASIC21.29■■□□□ 1
TTC39CQ8N584 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.29■■□□□ 1
TTC39CQ8N584 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TTC39CQ8N584 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.29■■□□□ 1
TTC39CQ8N584 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.29■■□□□ 1
TTC39CQ8N584 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.29■■□□□ 1
TTC39CQ8N584 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
TTC39CQ8N584 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.29■■□□□ 1
TTC39CQ8N584 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.29■■□□□ 1
TTC39CQ8N584 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.28■■□□□ 1
TTC39CQ8N584 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.28■■□□□ 1
TTC39CQ8N584 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.28■■□□□ 1
TTC39CQ8N584 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.28■■□□□ 1
TTC39CQ8N584 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.28■■□□□ 1
TTC39CQ8N584 SOX15-203ENST00000570788 1093 ntBASIC21.28■■□□□ 1
TTC39CQ8N584 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.28■■□□□ 1
TTC39CQ8N584 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC39CQ8N584 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TTC39CQ8N584 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TTC39CQ8N584 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.27■■□□□ 1
TTC39CQ8N584 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TTC39CQ8N584 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.27■■□□□ 1
TTC39CQ8N584 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TTC39CQ8N584 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.27■■□□□ 1
TTC39CQ8N584 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.27■■□□□ 1
TTC39CQ8N584 CD99P1-205ENST00000527459 561 ntBASIC21.27■■□□□ 1
TTC39CQ8N584 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.27■■□□□ 1
TTC39CQ8N584 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TTC39CQ8N584 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC39CQ8N584 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.27■□□□□ 0.99
TTC39CQ8N584 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 AC008687.6-201ENST00000596318 630 ntBASIC21.26■□□□□ 0.99
TTC39CQ8N584 AC120498.8-201ENST00000614275 531 ntBASIC21.26■□□□□ 0.99
TTC39CQ8N584 AC006557.6-201ENST00000623071 864 ntBASIC21.26■□□□□ 0.99
TTC39CQ8N584 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms