Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC28.21■■■□□ 2.11
LTBP4Q8N2S1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
LTBP4Q8N2S1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
LTBP4Q8N2S1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
LTBP4Q8N2S1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
LTBP4Q8N2S1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LTBP4Q8N2S1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LTBP4Q8N2S1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC28.19■■■□□ 2.1
LTBP4Q8N2S1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LTBP4Q8N2S1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 SPDYE13P-201ENST00000445314 798 ntBASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 MFAP1P1-201ENST00000442257 1255 ntBASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 GXYLT1P6-201ENST00000456472 1187 ntBASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 SLC25A6P4-201ENST00000586535 553 ntBASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC28.18■■■□□ 2.1
LTBP4Q8N2S1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTBP4Q8N2S1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
LTBP4Q8N2S1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC28.16■■■□□ 2.1
LTBP4Q8N2S1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC28.16■■■□□ 2.1
LTBP4Q8N2S1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 AC079781.3-201ENST00000449110 356 ntBASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 AC092183.1-201ENST00000469884 875 ntBASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 AC106795.1-205ENST00000512851 1056 ntBASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
LTBP4Q8N2S1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
LTBP4Q8N2S1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 AL023803.3-201ENST00000615559 522 ntBASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
LTBP4Q8N2S1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LTBP4Q8N2S1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
LTBP4Q8N2S1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC28.13■■■□□ 2.09
LTBP4Q8N2S1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
LTBP4Q8N2S1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC28.13■■■□□ 2.09
LTBP4Q8N2S1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.13■■■□□ 2.09
LTBP4Q8N2S1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms