Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST3Q8N1M1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
BEST3Q8N1M1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 AC008550.1-201ENST00000511500 884 ntBASIC18.58■□□□□ 0.56
BEST3Q8N1M1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST3Q8N1M1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 PLK5-205ENST00000642079 1969 ntBASIC18.57■□□□□ 0.56
BEST3Q8N1M1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST3Q8N1M1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 MTDHP1-201ENST00000605323 784 ntBASIC18.56■□□□□ 0.56
BEST3Q8N1M1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.56■□□□□ 0.56
BEST3Q8N1M1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST3Q8N1M1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms