Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC65Q8IXS2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CCDC65Q8IXS2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC65Q8IXS2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 HLA-G-202ENST00000376815 851 ntBASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 HLA-G-203ENST00000376818 1127 ntBASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.23■■□□□ 1.15
CCDC65Q8IXS2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 AC023632.3-201ENST00000521633 145 ntBASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 PCDHAC2-203ENST00000615316 3011 ntBASIC22.22■■□□□ 1.15
CCDC65Q8IXS2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 DUSP5P2-201ENST00000426873 1033 ntBASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 MIR4758-201ENST00000577688 71 ntBASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC65Q8IXS2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.2■■□□□ 1.15
CCDC65Q8IXS2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.2■■□□□ 1.15
CCDC65Q8IXS2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 AL109923.1-201ENST00000618799 583 ntBASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 KRT16P6-202ENST00000425692 1426 ntBASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC65Q8IXS2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 SLC25A24-204ENST00000569674 2357 ntBASIC22.19■■□□□ 1.14
CCDC65Q8IXS2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms