Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 AC120498.8-201ENST00000614275 531 ntBASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
C9orf40Q8IXQ3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.55
C9orf40Q8IXQ3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
C9orf40Q8IXQ3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.52■□□□□ 0.55
C9orf40Q8IXQ3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
C9orf40Q8IXQ3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
C9orf40Q8IXQ3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
C9orf40Q8IXQ3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 POM121L13P-201ENST00000422362 380 ntBASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 AC124283.5-201ENST00000624661 1809 ntBASIC18.51■□□□□ 0.55
C9orf40Q8IXQ3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 AC233263.1-201ENST00000578059 224 ntBASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 ITM2C-210ENST00000620962 501 ntBASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 AC073648.6-201ENST00000641589 218 ntBASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 BX119927.1-201ENST00000636596 1552 ntBASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.5■□□□□ 0.55
C9orf40Q8IXQ3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 AC128676.1-201ENST00000454392 318 ntBASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 RPS2P52-201ENST00000469610 820 ntBASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 AC069544.1-201ENST00000609399 999 ntBASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 AL391422.3-201ENST00000603791 2761 ntBASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
C9orf40Q8IXQ3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 KRT17P3-201ENST00000420566 1262 ntBASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 LINC01521-201ENST00000504184 1943 ntBASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 KRT16P6-202ENST00000425692 1426 ntBASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
C9orf40Q8IXQ3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C9orf40Q8IXQ3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
C9orf40Q8IXQ3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C9orf40Q8IXQ3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms