Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 AC007322.4-201ENST00000509611 723 ntBASIC18.74■□□□□ 0.59
CCDC71Q8IV32 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.73■□□□□ 0.59
CCDC71Q8IV32 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 AC069236.1-201ENST00000604339 616 ntBASIC18.73■□□□□ 0.59
CCDC71Q8IV32 OR10C1-204ENST00000622521 1039 ntBASIC18.73■□□□□ 0.59
CCDC71Q8IV32 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71Q8IV32 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 BX323043.1-201ENST00000641006 1765 ntBASIC18.72■□□□□ 0.59
CCDC71Q8IV32 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC71Q8IV32 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 BX276092.2-201ENST00000417668 665 ntBASIC18.71■□□□□ 0.59
CCDC71Q8IV32 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71Q8IV32 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms