Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 HLA-B-256ENST00000639848 1089 ntBASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 KRT16P6-202ENST00000425692 1426 ntBASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM90A1Q86YD7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
FAM90A1Q86YD7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.83■□□□□ 0.29
FAM90A1Q86YD7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
FAM90A1Q86YD7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
FAM90A1Q86YD7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 KRT18P6-201ENST00000555540 1265 ntBASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM90A1Q86YD7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 AC092368.3-202ENST00000574180 1591 ntBASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 RNA5SP413-201ENST00000516373 109 ntBASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 AC060766.5-201ENST00000590539 871 ntBASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 SLC25A24-204ENST00000569674 2357 ntBASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM90A1Q86YD7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM90A1Q86YD7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms