Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 BX323043.1-201ENST00000641006 1765 ntBASIC18.05■□□□□ 0.48
SHFQ7M4L6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 MIR638-201ENST00000385237 100 ntBASIC18.05■□□□□ 0.48
SHFQ7M4L6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 AC243732.1-201ENST00000612648 864 ntBASIC18.05■□□□□ 0.48
SHFQ7M4L6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SHFQ7M4L6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHFQ7M4L6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 SLC7A5P1-201ENST00000568957 537 ntBASIC18.04■□□□□ 0.48
SHFQ7M4L6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.04■□□□□ 0.48
SHFQ7M4L6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHFQ7M4L6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHFQ7M4L6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 AC005332.7-201ENST00000614046 2005 ntBASIC18.03■□□□□ 0.48
SHFQ7M4L6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHFQ7M4L6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.03■□□□□ 0.48
SHFQ7M4L6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHFQ7M4L6 AC093484.2-201ENST00000580996 2166 ntBASIC18.03■□□□□ 0.48
SHFQ7M4L6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHFQ7M4L6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.02■□□□□ 0.48
SHFQ7M4L6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 KRT8P36-201ENST00000489121 1440 ntBASIC18.02■□□□□ 0.48
SHFQ7M4L6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 TNXA-203ENST00000507684 2038 ntBASIC18.02■□□□□ 0.48
SHFQ7M4L6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 KRT18P14-201ENST00000534205 1250 ntBASIC18.02■□□□□ 0.48
SHFQ7M4L6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHFQ7M4L6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 BX119927.1-201ENST00000636596 1552 ntBASIC18.02■□□□□ 0.48
SHFQ7M4L6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.02■□□□□ 0.48
SHFQ7M4L6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms