Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC27A1Q6PCB7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC27A1Q6PCB7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 AL137060.1-201ENST00000618151 2648 ntBASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC27A1Q6PCB7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 AC012618.2-201ENST00000428058 849 ntBASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 NBPF21P-201ENST00000425093 1451 ntBASIC21.7■■□□□ 1.06
SLC27A1Q6PCB7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 RPS2P55-201ENST00000397318 883 ntBASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 AC107956.1-201ENST00000494359 873 ntBASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 AC233702.5-201ENST00000584107 538 ntBASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 KRT16P6-202ENST00000425692 1426 ntBASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC27A1Q6PCB7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC27A1Q6PCB7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms