Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 AP004607.7-201ENST00000527152 1677 ntBASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 SNX5-217ENST00000606557 1087 ntBASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.19■□□□□ 0.02
CDPF1Q6NVV7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 CICP6-201ENST00000457191 2729 ntBASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 AC018695.7-201ENST00000624587 2492 ntBASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CDPF1Q6NVV7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 AL022069.1-201ENST00000568025 1636 ntBASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDPF1Q6NVV7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms