Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 HYMAI.1-201ENST00000620949 238 ntBASIC19.62■□□□□ 0.73
RIF1Q5UIP0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIF1Q5UIP0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIF1Q5UIP0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.6■□□□□ 0.73
RIF1Q5UIP0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 VENTXP5-201ENST00000523979 775 ntBASIC19.6■□□□□ 0.73
RIF1Q5UIP0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 ATP5G2P1-201ENST00000433580 426 ntBASIC19.6■□□□□ 0.73
RIF1Q5UIP0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.6■□□□□ 0.73
RIF1Q5UIP0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 MIR3180-1-201ENST00000580374 94 ntBASIC19.59■□□□□ 0.73
RIF1Q5UIP0 MIR3180-3-201ENST00000584616 94 ntBASIC19.59■□□□□ 0.73
RIF1Q5UIP0 AC083849.1-201ENST00000615227 514 ntBASIC19.59■□□□□ 0.73
RIF1Q5UIP0 AC117500.6-201ENST00000624871 588 ntBASIC19.59■□□□□ 0.73
RIF1Q5UIP0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 AC116562.4-202ENST00000641738 218 ntBASIC19.59■□□□□ 0.73
RIF1Q5UIP0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.59■□□□□ 0.73
RIF1Q5UIP0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.58■□□□□ 0.73
RIF1Q5UIP0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIF1Q5UIP0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
RIF1Q5UIP0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.58■□□□□ 0.73
RIF1Q5UIP0 IFNL4P1-201ENST00000607083 540 ntBASIC19.58■□□□□ 0.73
RIF1Q5UIP0 AL031432.5-201ENST00000641059 760 ntBASIC19.58■□□□□ 0.73
RIF1Q5UIP0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.58■□□□□ 0.72
RIF1Q5UIP0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIF1Q5UIP0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RIF1Q5UIP0 HMGN1P19-201ENST00000436976 333 ntBASIC19.58■□□□□ 0.72
RIF1Q5UIP0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.58■□□□□ 0.72
RIF1Q5UIP0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.58■□□□□ 0.72
RIF1Q5UIP0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.58■□□□□ 0.72
RIF1Q5UIP0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.58■□□□□ 0.72
RIF1Q5UIP0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms