Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 AC091799.1-201ENST00000422823 811 ntBASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 DUX4L2-201ENST00000561772 1275 ntBASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 DUX4L6-201ENST00000626483 1275 ntBASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 DUX4L1-201ENST00000627662 1275 ntBASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 DUX4L8-201ENST00000629013 1275 ntBASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 DUX4L3-201ENST00000630187 1275 ntBASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 DUX4L7-201ENST00000630678 1275 ntBASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 DUX4L5-201ENST00000630834 1275 ntBASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00242Q5T6M2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00242Q5T6M2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 IRS3P-201ENST00000223076 1006 ntBASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms