Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 AC116407.4-201ENST00000623319 1061 ntBASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 AC087742.1-201ENST00000575880 1738 ntBASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 AC005332.1-201ENST00000577698 1310 ntBASIC19.5■□□□□ 0.71
RSPO4Q2I0M5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 DGCR10-201ENST00000609839 495 ntBASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO4Q2I0M5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 AL671277.2-201ENST00000458060 996 ntBASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 AC011558.1-201ENST00000623459 338 ntBASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO4Q2I0M5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 C1orf229-201ENST00000623686 2258 ntBASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RSPO4Q2I0M5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 SLC25A1P4-201ENST00000567977 778 ntBASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms