Protein–RNA interactions for Protein: Q04947

RTN1, Reticulon-like protein 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTN1Q04947 RPS30BYOR182C 192 nt1.04□□□□□ -2.24
RTN1Q04947 BUD3YCL014W 4911 nt1.04□□□□□ -2.24
RTN1Q04947 YER181CYER181C 324 nt1.03□□□□□ -2.24
RTN1Q04947 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
RTN1Q04947 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
RTN1Q04947 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
RTN1Q04947 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
RTN1Q04947 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
RTN1Q04947 YNL028WYNL028W 318 nt1.03□□□□□ -2.24
RTN1Q04947 YOR015WYOR015W 360 nt1.03□□□□□ -2.24
RTN1Q04947 YBR200W-AYBR200W-A 165 nt1.02□□□□□ -2.25
RTN1Q04947 WAR1YML076C 2835 nt1.01□□□□□ -2.25
RTN1Q04947 YEL020C-BYEL020C-B 198 nt1.01□□□□□ -2.25
RTN1Q04947 ECM12YHR021W-A 456 nt1.01□□□□□ -2.25
RTN1Q04947 SCC2YDR180W 4482 nt1.01□□□□□ -2.25
RTN1Q04947 KAP120YPL125W 3099 nt1□□□□□ -2.25
RTN1Q04947 PAM16YJL104W 450 nt1□□□□□ -2.25
RTN1Q04947 YLR120W-AYLR120W-A 102 nt1□□□□□ -2.25
RTN1Q04947 IES4YOR189W 351 nt1□□□□□ -2.25
RTN1Q04947 YOR218CYOR218C 420 nt1□□□□□ -2.25
RTN1Q04947 DOP1YDR141C 5097 nt1□□□□□ -2.25
RTN1Q04947 YPR117WYPR117W 7470 nt1□□□□□ -2.25
RTN1Q04947 YOR008C-AYOR008C-A 225 nt0.99□□□□□ -2.25
RTN1Q04947 NUP157YER105C 4176 nt0.98□□□□□ -2.25
RTN1Q04947 YMR172C-AYMR172C-A 384 nt0.98□□□□□ -2.25
RTN1Q04947 GEA2YEL022W 4380 nt0.98□□□□□ -2.25
RTN1Q04947 YML099W-AYML099W-A 330 nt0.97□□□□□ -2.25
RTN1Q04947 MCM10YIL150C 1716 nt0.97□□□□□ -2.25
RTN1Q04947 YGL052WYGL052W 306 nt0.96□□□□□ -2.26
RTN1Q04947 OLI1Q0130 231 nt0.96□□□□□ -2.26
RTN1Q04947 YJL197C-AYJL197C-A 282 nt0.96□□□□□ -2.26
RTN1Q04947 SGF11YPL047W 300 nt0.96□□□□□ -2.26
RTN1Q04947 YPL152W-AYPL152W-A 99 nt0.96□□□□□ -2.26
RTN1Q04947 SMC1YFL008W 3678 nt0.94□□□□□ -2.26
RTN1Q04947 YDR354C-AYDR354C-A 144 nt0.93□□□□□ -2.26
RTN1Q04947 YPR092WYPR092W 306 nt0.93□□□□□ -2.26
RTN1Q04947 PRP16YKR086W 3216 nt0.93□□□□□ -2.26
RTN1Q04947 YDL073WYDL073W 2955 nt0.92□□□□□ -2.26
RTN1Q04947 YIL142C-AYIL142C-A 333 nt0.92□□□□□ -2.26
RTN1Q04947 CMC4YMR194C-B 222 nt0.92□□□□□ -2.26
RTN1Q04947 YNL211CYNL211C 261 nt0.92□□□□□ -2.26
RTN1Q04947 snR74snR74 88 nt0.91□□□□□ -2.26
RTN1Q04947 BEM2YER155C 6504 nt0.91□□□□□ -2.26
RTN1Q04947 NOP9YJL010C 2001 nt0.9□□□□□ -2.27
RTN1Q04947 YDL196WYDL196W 330 nt0.89□□□□□ -2.27
RTN1Q04947 YJL026C-AYJL026C-A 222 nt0.89□□□□□ -2.27
RTN1Q04947 YLL019W-AYLL019W-A 93 nt0.89□□□□□ -2.27
RTN1Q04947 YOR282WYOR282W 321 nt0.89□□□□□ -2.27
RTN1Q04947 snR49snR49 165 nt0.89□□□□□ -2.27
RTN1Q04947 PAU24YBR301W 363 nt0.89□□□□□ -2.27
RTN1Q04947 YCR022CYCR022C 345 nt0.88□□□□□ -2.27
RTN1Q04947 YFR012W-AYFR012W-A 87 nt0.88□□□□□ -2.27
RTN1Q04947 PAU12YGR294W 363 nt0.88□□□□□ -2.27
RTN1Q04947 YHR063W-AYHR063W-A 336 nt0.88□□□□□ -2.27
RTN1Q04947 UTP20YBL004W 7482 nt0.88□□□□□ -2.27
RTN1Q04947 ISD11YER048W-A 285 nt0.87□□□□□ -2.27
RTN1Q04947 YMR307C-AYMR307C-A 195 nt0.87□□□□□ -2.27
RTN1Q04947 ASE1YOR058C 2658 nt0.87□□□□□ -2.27
RTN1Q04947 tF(GAA)QtF(GAA)Q 75 nt0.86□□□□□ -2.27
RTN1Q04947 YAL067W-AYAL067W-A 228 nt0.86□□□□□ -2.27
RTN1Q04947 YPL044CYPL044C 549 nt0.86□□□□□ -2.27
RTN1Q04947 PAA1YDR071C 576 nt0.85□□□□□ -2.27
RTN1Q04947 tF(GAA)BtF(GAA)B 73 nt0.85□□□□□ -2.27
RTN1Q04947 tF(GAA)FtF(GAA)F 73 nt0.85□□□□□ -2.27
RTN1Q04947 tF(GAA)GtF(GAA)G 73 nt0.85□□□□□ -2.27
RTN1Q04947 tF(GAA)H1tF(GAA)H1 73 nt0.85□□□□□ -2.27
RTN1Q04947 tF(GAA)H2tF(GAA)H2 73 nt0.85□□□□□ -2.27
RTN1Q04947 tF(GAA)MtF(GAA)M 73 nt0.85□□□□□ -2.27
RTN1Q04947 tF(GAA)P1tF(GAA)P1 73 nt0.85□□□□□ -2.27
RTN1Q04947 tF(GAA)P2tF(GAA)P2 73 nt0.85□□□□□ -2.27
RTN1Q04947 YGL041CYGL041C 204 nt0.85□□□□□ -2.27
RTN1Q04947 YOR072W-BYOR072W-B 162 nt0.85□□□□□ -2.27
RTN1Q04947 BFR2YDR299W 1605 nt0.85□□□□□ -2.27
RTN1Q04947 YDL185C-AYDL185C-A 228 nt0.84□□□□□ -2.27
RTN1Q04947 snR55snR55 98 nt0.83□□□□□ -2.28
RTN1Q04947 YGL188C-AYGL188C-A 141 nt0.82□□□□□ -2.28
RTN1Q04947 QCR9YGR183C 201 nt0.82□□□□□ -2.28
RTN1Q04947 YIR030W-AYIR030W-A 384 nt0.82□□□□□ -2.28
RTN1Q04947 YOL155W-AYOL155W-A 135 nt0.82□□□□□ -2.28
RTN1Q04947 PMP1YCR024C-A 123 nt0.81□□□□□ -2.28
RTN1Q04947 RPL26BYGR034W 384 nt0.81□□□□□ -2.28
RTN1Q04947 ABF2YMR072W 552 nt0.81□□□□□ -2.28
RTN1Q04947 RKR1YMR247C 4689 nt0.81□□□□□ -2.28
RTN1Q04947 snR8snR8 190 nt0.8□□□□□ -2.28
RTN1Q04947 YMR160WYMR160W 2451 nt0.8□□□□□ -2.28
RTN1Q04947 NPR2YEL062W 1848 nt0.8□□□□□ -2.28
RTN1Q04947 snR80snR80 171 nt0.79□□□□□ -2.28
RTN1Q04947 COY1YKL179C 2040 nt0.79□□□□□ -2.28
RTN1Q04947 YCR018C-AYCR018C-A 255 nt0.78□□□□□ -2.28
RTN1Q04947 YBR182C-AYBR182C-A 195 nt0.78□□□□□ -2.28
RTN1Q04947 snR190snR190 190 nt0.77□□□□□ -2.29
RTN1Q04947 YKU70YMR284W 1809 nt0.77□□□□□ -2.29
RTN1Q04947 YIL134C-AYIL134C-A 204 nt0.76□□□□□ -2.29
RTN1Q04947 YDR366CYDR366C 399 nt0.75□□□□□ -2.29
RTN1Q04947 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
RTN1Q04947 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
RTN1Q04947 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
RTN1Q04947 tT(AGU)HtT(AGU)H 73 nt0.75□□□□□ -2.29
RTN1Q04947 tT(AGU)I1tT(AGU)I1 73 nt0.75□□□□□ -2.29
RTN1Q04947 tT(AGU)I2tT(AGU)I2 73 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 23.5 ms