Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 COX12YLR038C 252 nt1.92□□□□□ -2.1
SSL1Q04673 NUT1YGL151W 3399 nt1.9□□□□□ -2.11
SSL1Q04673 YCR038W-AYCR038W-A 126 nt1.9□□□□□ -2.11
SSL1Q04673 SEC31YDL195W 3822 nt1.9□□□□□ -2.11
SSL1Q04673 YJL022WYJL022W 309 nt1.9□□□□□ -2.11
SSL1Q04673 YDL206WYDL206W 2289 nt1.9□□□□□ -2.11
SSL1Q04673 MYO2YOR326W 4725 nt1.9□□□□□ -2.11
SSL1Q04673 YGR109W-BYGR109W-B 4644 nt1.89□□□□□ -2.11
SSL1Q04673 UBP2YOR124C 3819 nt1.89□□□□□ -2.11
SSL1Q04673 TBS1YBR150C 3285 nt1.88□□□□□ -2.11
SSL1Q04673 YIL002W-AYIL002W-A 210 nt1.88□□□□□ -2.11
SSL1Q04673 EMC5YIL027C 426 nt1.88□□□□□ -2.11
SSL1Q04673 NUP192YJL039C 5052 nt1.88□□□□□ -2.11
SSL1Q04673 NEO1YIL048W 3456 nt1.87□□□□□ -2.11
SSL1Q04673 YNL211CYNL211C 261 nt1.87□□□□□ -2.11
SSL1Q04673 PRP5YBR237W 2550 nt1.87□□□□□ -2.11
SSL1Q04673 LHS1YKL073W 2646 nt1.87□□□□□ -2.11
SSL1Q04673 ALY2YJL084C 3141 nt1.86□□□□□ -2.11
SSL1Q04673 PAN2YGL094C 3348 nt1.86□□□□□ -2.11
SSL1Q04673 SSK2YNR031C 4740 nt1.85□□□□□ -2.11
SSL1Q04673 YAL067W-AYAL067W-A 228 nt1.85□□□□□ -2.11
SSL1Q04673 YCL001W-BYCL001W-B 255 nt1.85□□□□□ -2.11
SSL1Q04673 RAD50YNL250W 3939 nt1.85□□□□□ -2.11
SSL1Q04673 MMS4YBR098W 2076 nt1.84□□□□□ -2.11
SSL1Q04673 YMR247W-AYMR247W-A 144 nt1.84□□□□□ -2.11
SSL1Q04673 PAU12YGR294W 363 nt1.83□□□□□ -2.12
SSL1Q04673 PAU24YBR301W 363 nt1.83□□□□□ -2.12
SSL1Q04673 YOR019WYOR019W 2193 nt1.82□□□□□ -2.12
SSL1Q04673 RSM22YKL155C 1887 nt1.82□□□□□ -2.12
SSL1Q04673 YMR272W-BYMR272W-B 108 nt1.82□□□□□ -2.12
SSL1Q04673 UFD2YDL190C 2886 nt1.81□□□□□ -2.12
SSL1Q04673 YFR012W-AYFR012W-A 87 nt1.81□□□□□ -2.12
SSL1Q04673 YKL100W-AYKL100W-A 90 nt1.8□□□□□ -2.12
SSL1Q04673 BPH1YCR032W 6504 nt1.8□□□□□ -2.12
SSL1Q04673 YLL054CYLL054C 2532 nt1.8□□□□□ -2.12
SSL1Q04673 POL5YEL055C 3069 nt1.8□□□□□ -2.12
SSL1Q04673 UTP8YGR128C 2142 nt1.79□□□□□ -2.12
SSL1Q04673 YER053C-AYER053C-A 114 nt1.79□□□□□ -2.12
SSL1Q04673 tT(UGU)HtT(UGU)H 72 nt1.79□□□□□ -2.12
SSL1Q04673 YOR329W-AYOR329W-A 210 nt1.79□□□□□ -2.12
SSL1Q04673 YBR178WYBR178W 375 nt1.79□□□□□ -2.12
SSL1Q04673 SMC1YFL008W 3678 nt1.78□□□□□ -2.12
SSL1Q04673 YCS4YLR272C 3531 nt1.78□□□□□ -2.12
SSL1Q04673 SKI3YPR189W 4299 nt1.77□□□□□ -2.13
SSL1Q04673 YDR524C-AYDR524C-A 120 nt1.77□□□□□ -2.13
SSL1Q04673 tL(UAA)QtL(UAA)Q 85 nt1.77□□□□□ -2.13
SSL1Q04673 YGL123C-AYGL123C-A 231 nt1.77□□□□□ -2.13
SSL1Q04673 PKH3YDR466W 2697 nt1.77□□□□□ -2.13
SSL1Q04673 SLX4YLR135W 2247 nt1.76□□□□□ -2.13
SSL1Q04673 COA6YMR244C-A 315 nt1.76□□□□□ -2.13
SSL1Q04673 CDC31YOR257W 486 nt1.76□□□□□ -2.13
SSL1Q04673 DNF3YMR162C 4971 nt1.76□□□□□ -2.13
SSL1Q04673 CHS6YJL099W 2241 nt1.75□□□□□ -2.13
SSL1Q04673 YAR009CYAR009C 3591 nt1.75□□□□□ -2.13
SSL1Q04673 YLL020CYLL020C 306 nt1.75□□□□□ -2.13
SSL1Q04673 MDS3YGL197W 4464 nt1.75□□□□□ -2.13
SSL1Q04673 YLR422WYLR422W 5799 nt1.75□□□□□ -2.13
SSL1Q04673 YOR093CYOR093C 4947 nt1.74□□□□□ -2.13
SSL1Q04673 UBR2YLR024C 5619 nt1.74□□□□□ -2.13
SSL1Q04673 YGL182CYGL182C 324 nt1.74□□□□□ -2.13
SSL1Q04673 KCS1YDR017C 3153 nt1.73□□□□□ -2.13
SSL1Q04673 COX5BYIL111W 456 nt1.73□□□□□ -2.13
SSL1Q04673 YLR282CYLR282C 342 nt1.73□□□□□ -2.13
SSL1Q04673 BFR2YDR299W 1605 nt1.73□□□□□ -2.13
SSL1Q04673 CMC4YMR194C-B 222 nt1.72□□□□□ -2.13
SSL1Q04673 SMC4YLR086W 4257 nt1.71□□□□□ -2.13
SSL1Q04673 RTP1YMR185W 2946 nt1.71□□□□□ -2.14
SSL1Q04673 MEC1YBR136W 7107 nt1.71□□□□□ -2.14
SSL1Q04673 YCR095W-AYCR095W-A 159 nt1.7□□□□□ -2.14
SSL1Q04673 YBR099CYBR099C 384 nt1.7□□□□□ -2.14
SSL1Q04673 EAF1YDR359C 2949 nt1.69□□□□□ -2.14
SSL1Q04673 OST4YDL232W 111 nt1.69□□□□□ -2.14
SSL1Q04673 FYV8YGR196C 2454 nt1.68□□□□□ -2.14
SSL1Q04673 CDC25YLR310C 4770 nt1.68□□□□□ -2.14
SSL1Q04673 YOR161W-AYOR161W-A 81 nt1.68□□□□□ -2.14
SSL1Q04673 snR14snR14 160 nt1.68□□□□□ -2.14
SSL1Q04673 YML002WYML002W 2214 nt1.67□□□□□ -2.14
SSL1Q04673 CLU1YMR012W 3834 nt1.66□□□□□ -2.14
SSL1Q04673 YBL039C-AYBL039C-A 84 nt1.66□□□□□ -2.14
SSL1Q04673 CFT1YDR301W 4074 nt1.66□□□□□ -2.14
SSL1Q04673 PMD1YER132C 5262 nt1.65□□□□□ -2.14
SSL1Q04673 KAP122YGL016W 3246 nt1.65□□□□□ -2.14
SSL1Q04673 ROM2YLR371W 4071 nt1.65□□□□□ -2.14
SSL1Q04673 YDR544CYDR544C 429 nt1.65□□□□□ -2.15
SSL1Q04673 YBL109WYBL109W 336 nt1.65□□□□□ -2.15
SSL1Q04673 VPS15YBR097W 4365 nt1.64□□□□□ -2.15
SSL1Q04673 NOP9YJL010C 2001 nt1.64□□□□□ -2.15
SSL1Q04673 SOM1YEL059C-A 225 nt1.64□□□□□ -2.15
SSL1Q04673 YIL071W-AYIL071W-A 477 nt1.64□□□□□ -2.15
SSL1Q04673 STO1YMR125W 2586 nt1.64□□□□□ -2.15
SSL1Q04673 MSH3YCR092C 3057 nt1.63□□□□□ -2.15
SSL1Q04673 SET3YKR029C 2256 nt1.63□□□□□ -2.15
SSL1Q04673 YNL067W-BYNL067W-B 141 nt1.63□□□□□ -2.15
SSL1Q04673 WAR1YML076C 2835 nt1.62□□□□□ -2.15
SSL1Q04673 CHS1YNL192W 3396 nt1.62□□□□□ -2.15
SSL1Q04673 TFB5YDR079C-A 219 nt1.62□□□□□ -2.15
SSL1Q04673 PMP2YEL017C-A 132 nt1.62□□□□□ -2.15
SSL1Q04673 YMR326CYMR326C 309 nt1.62□□□□□ -2.15
SSL1Q04673 FIG2YCR089W 4830 nt1.61□□□□□ -2.15
SSL1Q04673 BRR2YER172C 6492 nt1.61□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 103.8 ms