Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK3Q00526 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CDK3Q00526 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 UBE2SP1-201ENST00000450587 669 ntBASIC19.73■□□□□ 0.75
CDK3Q00526 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK3Q00526 AC093827.2-201ENST00000512654 315 ntBASIC19.73■□□□□ 0.75
CDK3Q00526 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.73■□□□□ 0.75
CDK3Q00526 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK3Q00526 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CDK3Q00526 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK3Q00526 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.73■□□□□ 0.75
CDK3Q00526 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK3Q00526 AC124016.1-201ENST00000609552 612 ntBASIC19.73■□□□□ 0.75
CDK3Q00526 AL121906.2-201ENST00000621597 723 ntBASIC19.73■□□□□ 0.75
CDK3Q00526 AP006294.2-201ENST00000641667 209 ntBASIC19.73■□□□□ 0.75
CDK3Q00526 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDK3Q00526 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDK3Q00526 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDK3Q00526 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDK3Q00526 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK3Q00526 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDK3Q00526 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK3Q00526 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK3Q00526 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK3Q00526 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.72■□□□□ 0.75
CDK3Q00526 PRKY-204ENST00000533551 1019 ntBASIC19.72■□□□□ 0.75
CDK3Q00526 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK3Q00526 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK3Q00526 AC073314.1-201ENST00000568729 2216 ntBASIC19.72■□□□□ 0.75
CDK3Q00526 AC020907.5-201ENST00000624372 1936 ntBASIC19.72■□□□□ 0.75
CDK3Q00526 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.72■□□□□ 0.75
CDK3Q00526 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK3Q00526 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CDK3Q00526 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK3Q00526 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK3Q00526 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK3Q00526 AC133681.1-201ENST00000465482 601 ntBASIC19.71■□□□□ 0.75
CDK3Q00526 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDK3Q00526 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CDK3Q00526 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK3Q00526 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK3Q00526 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CDK3Q00526 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK3Q00526 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 KRASP1-201ENST00000407852 552 ntBASIC19.7■□□□□ 0.74
CDK3Q00526 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.7■□□□□ 0.74
CDK3Q00526 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.7■□□□□ 0.74
CDK3Q00526 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK3Q00526 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDK3Q00526 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK3Q00526 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CDK3Q00526 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK3Q00526 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDK3Q00526 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK3Q00526 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK3Q00526 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 KRT16P6-202ENST00000425692 1426 ntBASIC19.69■□□□□ 0.74
CDK3Q00526 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK3Q00526 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms