Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
CBX1P83916 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX1P83916 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CBX1P83916 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX1P83916 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CBX1P83916 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.99■□□□□ 0.95
CBX1P83916 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.98■□□□□ 0.95
CBX1P83916 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.98■□□□□ 0.95
CBX1P83916 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CBX1P83916 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CBX1P83916 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.98■□□□□ 0.95
CBX1P83916 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.98■□□□□ 0.95
CBX1P83916 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.98■□□□□ 0.95
CBX1P83916 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.98■□□□□ 0.95
CBX1P83916 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CBX1P83916 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CBX1P83916 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX1P83916 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CBX1P83916 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX1P83916 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CBX1P83916 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX1P83916 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX1P83916 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.97■□□□□ 0.95
CBX1P83916 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.97■□□□□ 0.95
CBX1P83916 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.97■□□□□ 0.95
CBX1P83916 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CBX1P83916 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX1P83916 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX1P83916 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX1P83916 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.97■□□□□ 0.95
CBX1P83916 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CBX1P83916 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CBX1P83916 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.96■□□□□ 0.95
CBX1P83916 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CBX1P83916 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.96■□□□□ 0.95
CBX1P83916 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.96■□□□□ 0.95
CBX1P83916 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CBX1P83916 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CBX1P83916 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.96■□□□□ 0.95
CBX1P83916 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX1P83916 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CBX1P83916 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.95■□□□□ 0.94
CBX1P83916 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.95■□□□□ 0.94
CBX1P83916 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.95■□□□□ 0.94
CBX1P83916 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.95■□□□□ 0.94
CBX1P83916 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CBX1P83916 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CBX1P83916 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.94■□□□□ 0.94
CBX1P83916 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.94■□□□□ 0.94
CBX1P83916 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 TMEM179-206ENST00000616017 1645 ntBASIC20.94■□□□□ 0.94
CBX1P83916 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.94■□□□□ 0.94
CBX1P83916 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.94■□□□□ 0.94
CBX1P83916 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CBX1P83916 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CBX1P83916 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.94■□□□□ 0.94
CBX1P83916 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CBX1P83916 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.94■□□□□ 0.94
CBX1P83916 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms