Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 FBXO44-206ENST00000376770 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.782e-8■■□□□ 13.4
LSM11P83369 FBXO44-208ENST00000471895 769 ntTSL 39.78□□□□□ -0.842e-8■■□□□ 13.4
LSM11P83369 MCF2L-219ENST00000453297 1819 ntTSL 522.71■■□□□ 1.233e-7■■□□□ 13.3
LSM11P83369 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.68■□□□□ 0.13e-7■■□□□ 13.3
LSM11P83369 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.13e-7■■□□□ 13.3
LSM11P83369 NFRKB-201ENST00000446488 5093 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.883e-7■■□□□ 13.3
LSM11P83369 HAL-201ENST00000261208 3913 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.91e-10■■□□□ 13.3
LSM11P83369 HAL-203ENST00000541929 3846 ntTSL 2 BASIC9.37□□□□□ -0.911e-10■■□□□ 13.3
LSM11P83369 ORC2-201ENST00000234296 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.913e-7■■□□□ 13.3
LSM11P83369 ORC2-204ENST00000464147 2185 ntTSL 57.38□□□□□ -1.233e-7■■□□□ 13.3
LSM11P83369 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.43□□□□□ -1.863e-7■■□□□ 13.3
LSM11P83369 UCKL1-207ENST00000632800 1530 ntTSL 513.58□□□□□ -0.249e-9■■□□□ 13.3
LSM11P83369 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.399e-7■■□□□ 13.3
LSM11P83369 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.77□□□□□ -0.539e-7■■□□□ 13.3
LSM11P83369 ZMYM3-209ENST00000489332 5723 ntTSL 510.26□□□□□ -0.779e-7■■□□□ 13.3
LSM11P83369 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.959e-7■■□□□ 13.3
LSM11P83369 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC8.94□□□□□ -0.989e-7■■□□□ 13.3
LSM11P83369 ABHD17A-203ENST00000588598 5425 ntTSL 217.38■□□□□ 0.371e-6■■□□□ 13.3
LSM11P83369 ABHD17A-205ENST00000591351 4647 ntTSL 216.05■□□□□ 0.161e-6■■□□□ 13.3
LSM11P83369 RHBG-208ENST00000620376 1984 ntTSL 220.32■□□□□ 0.842e-8■■□□□ 13.3
LSM11P83369 RHBG-201ENST00000451864 1927 ntTSL 219.64■□□□□ 0.732e-8■■□□□ 13.3
LSM11P83369 RHBG-205ENST00000612897 1862 ntTSL 1 (best)15.84■□□□□ 0.132e-8■■□□□ 13.3
LSM11P83369 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.122e-8■■□□□ 13.3
LSM11P83369 RHBG-206ENST00000613460 1912 ntTSL 1 (best)12.78□□□□□ -0.362e-8■■□□□ 13.3
LSM11P83369 RHBG-207ENST00000618120 2424 ntTSL 212.78□□□□□ -0.362e-8■■□□□ 13.3
LSM11P83369 SQSTM1-215ENST00000514093 842 ntTSL 517.96■□□□□ 0.472e-6■■□□□ 13.3
LSM11P83369 SQSTM1-212ENST00000508284 578 ntTSL 415.83■□□□□ 0.122e-6■■□□□ 13.3
LSM11P83369 SQSTM1-204ENST00000453046 572 ntTSL 415.83■□□□□ 0.122e-6■■□□□ 13.3
LSM11P83369 SQSTM1-209ENST00000504627 602 ntTSL 515.83■□□□□ 0.122e-6■■□□□ 13.3
LSM11P83369 SQSTM1-205ENST00000464493 532 ntTSL 412.82□□□□□ -0.362e-6■■□□□ 13.3
LSM11P83369 SQSTM1-207ENST00000481335 562 ntTSL 410.52□□□□□ -0.732e-6■■□□□ 13.3
LSM11P83369 SQSTM1-203ENST00000422245 628 ntTSL 410.03□□□□□ -0.82e-6■■□□□ 13.3
LSM11P83369 HIST1H2APS5-201ENST00000454320 369 ntBASIC9.67□□□□□ -0.863e-6■■□□□ 13.3
LSM11P83369 DHRS2-209ENST00000557535 927 ntTSL 514.78□□□□□ -0.049e-33■■□□□ 13.3
LSM11P83369 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.447e-7■■□□□ 13.3
LSM11P83369 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.537e-7■■□□□ 13.3
LSM11P83369 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.96■■□□□ 1.751e-7■■□□□ 13.3
LSM11P83369 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.25■■□□□ 1.471e-7■■□□□ 13.3
LSM11P83369 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.181e-7■■□□□ 13.3
LSM11P83369 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.95■■□□□ 1.11e-7■■□□□ 13.3
LSM11P83369 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.1■□□□□ 0.971e-7■■□□□ 13.3
LSM11P83369 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.73■□□□□ 0.911e-7■■□□□ 13.3
LSM11P83369 PCYT2-218ENST00000576343 1006 ntTSL 519.54■□□□□ 0.721e-7■■□□□ 13.3
LSM11P83369 NECAB3-207ENST00000478237 827 ntTSL 219.51■□□□□ 0.713e-7■■□□□ 13.3
LSM11P83369 NECAB3-209ENST00000483813 1277 ntTSL 517.86■□□□□ 0.453e-7■■□□□ 13.3
LSM11P83369 CFB-277ENST00000467360 1082 ntTSL 58.81□□□□□ -16e-7■■□□□ 13.3
LSM11P83369 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.17e-6■■□□□ 13.3
LSM11P83369 KCTD15-204ENST00000587658 632 ntTSL 321.04■□□□□ 0.967e-6■■□□□ 13.3
LSM11P83369 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.957e-6■■□□□ 13.3
LSM11P83369 KCTD15-205ENST00000588637 571 ntTSL 515.29■□□□□ 0.047e-6■■□□□ 13.3
LSM11P83369 KCTD15-209ENST00000590771 577 ntTSL 314.43□□□□□ -0.17e-6■■□□□ 13.3
LSM11P83369 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.08□□□□□ -0.167e-6■■□□□ 13.3
LSM11P83369 KCTD15-203ENST00000587559 622 ntTSL 413.77□□□□□ -0.217e-6■■□□□ 13.3
LSM11P83369 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.08□□□□□ -0.167e-15■■□□□ 13.3
LSM11P83369 BCL6-208ENST00000479110 635 ntTSL 216.14■□□□□ 0.177e-7■■□□□ 13.3
LSM11P83369 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.894e-7■■□□□ 13.3
LSM11P83369 FAM229A-201ENST00000415596 446 ntTSL 313.66□□□□□ -0.225e-7■■□□□ 13.3
LSM11P83369 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.54□□□□□ -0.46e-13■■□□□ 13.3
LSM11P83369 SNHG25-201ENST00000580828 106 ntTSL 210.49□□□□□ -0.736e-13■■□□□ 13.3
LSM11P83369 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.169e-7■■□□□ 13.3
LSM11P83369 FAM178B-205ENST00000494172 592 ntTSL 315.79■□□□□ 0.129e-7■■□□□ 13.3
LSM11P83369 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.589e-7■■□□□ 13.3
LSM11P83369 FAM178B-202ENST00000470789 722 ntTSL 1 (best)10.14□□□□□ -0.799e-7■■□□□ 13.3
LSM11P83369 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.645e-7■■□□□ 13.3
LSM11P83369 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.278e-11■■□□□ 13.3
LSM11P83369 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.11■■□□□ 1.138e-11■■□□□ 13.3
LSM11P83369 TMEM150A-209ENST00000444380 1810 ntTSL 521.34■■□□□ 1.018e-11■■□□□ 13.3
LSM11P83369 TMEM150A-207ENST00000431593 2323 ntTSL 218.98■□□□□ 0.638e-11■■□□□ 13.3
LSM11P83369 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.198e-11■■□□□ 13.3
LSM11P83369 TMEM150A-212ENST00000463363 776 ntTSL 210.47□□□□□ -0.738e-11■■□□□ 13.3
LSM11P83369 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.513e-6■■□□□ 13.2
LSM11P83369 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.18■□□□□ 0.183e-6■■□□□ 13.2
LSM11P83369 KMT5C-203ENST00000445196 2077 ntTSL 515.78■□□□□ 0.123e-6■■□□□ 13.2
LSM11P83369 CAPN12-211ENST00000601685 2552 nt15.67■□□□□ 0.11e-6■■□□□ 13.2
LSM11P83369 CAPN12-206ENST00000597354 519 ntTSL 314.85□□□□□ -0.031e-6■■□□□ 13.2
LSM11P83369 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.045e-7■■□□□ 13.2
LSM11P83369 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.29□□□□□ -0.445e-7■■□□□ 13.2
LSM11P83369 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC10.99□□□□□ -0.655e-7■■□□□ 13.2
LSM11P83369 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC10.1□□□□□ -0.795e-7■■□□□ 13.2
LSM11P83369 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.154e-7■■□□□ 13.2
LSM11P83369 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.65■□□□□ 0.14e-7■■□□□ 13.2
LSM11P83369 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.054e-7■■□□□ 13.2
LSM11P83369 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.251e-8■■□□□ 13.2
LSM11P83369 AP1G2-204ENST00000465445 2554 ntTSL 512.25□□□□□ -0.451e-8■■□□□ 13.2
LSM11P83369 AP1G2-203ENST00000460049 2672 ntTSL 1 (best)12.05□□□□□ -0.481e-8■■□□□ 13.2
LSM11P83369 AP1G2-205ENST00000535852 2471 ntTSL 1 (best)11.84□□□□□ -0.511e-8■■□□□ 13.2
LSM11P83369 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.621e-8■■□□□ 13.2
LSM11P83369 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.655e-6■■□□□ 13.2
LSM11P83369 WDR4-205ENST00000476326 1977 ntTSL 1 (best)13.89□□□□□ -0.195e-6■■□□□ 13.2
LSM11P83369 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.582e-9■■□□□ 13.2
LSM11P83369 COG4-203ENST00000482252 2953 ntTSL 210.65□□□□□ -0.72e-9■■□□□ 13.2
LSM11P83369 COG4-201ENST00000323786 2833 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.712e-9■■□□□ 13.2
LSM11P83369 COG4-205ENST00000526700 1978 ntTSL 510.5□□□□□ -0.732e-9■■□□□ 13.2
LSM11P83369 COG4-211ENST00000564415 3000 ntTSL 59.95□□□□□ -0.822e-9■■□□□ 13.2
LSM11P83369 COG4-207ENST00000530314 3488 ntTSL 1 (best)9.62□□□□□ -0.872e-9■■□□□ 13.2
LSM11P83369 COG4-213ENST00000565715 575 ntTSL 28.98□□□□□ -0.972e-9■■□□□ 13.2
LSM11P83369 OAZ1-205ENST00000589361 679 ntTSL 1 (best)14.12□□□□□ -0.151e-7■■□□□ 13.2
LSM11P83369 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.372e-7■■□□□ 13.2
LSM11P83369 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.362e-7■■□□□ 13.2
LSM11P83369 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.082e-7■■□□□ 13.2
Retrieved 100 of 11,495 protein–RNA pairs in 82.6 ms