Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 CDCA4P2-201ENST00000441182 718 ntBASIC20.17■□□□□ 0.82
PRAMEP78395 AC026185.1-201ENST00000445748 174 ntBASIC20.17■□□□□ 0.82
PRAMEP78395 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEP78395 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.17■□□□□ 0.82
PRAMEP78395 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.17■□□□□ 0.82
PRAMEP78395 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRAMEP78395 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PRAMEP78395 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEP78395 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEP78395 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRAMEP78395 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PRAMEP78395 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEP78395 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEP78395 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEP78395 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 AC093787.1-201ENST00000450396 207 ntBASIC20.16■□□□□ 0.82
PRAMEP78395 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEP78395 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEP78395 AL589743.5-201ENST00000616611 1050 ntBASIC20.16■□□□□ 0.82
PRAMEP78395 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEP78395 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEP78395 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEP78395 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEP78395 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEP78395 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEP78395 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEP78395 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEP78395 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEP78395 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEP78395 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEP78395 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.15■□□□□ 0.82
PRAMEP78395 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEP78395 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEP78395 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.15■□□□□ 0.82
PRAMEP78395 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEP78395 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEP78395 AC007952.6-201ENST00000573168 2673 ntBASIC20.15■□□□□ 0.82
PRAMEP78395 AC003957.1-201ENST00000625108 2673 ntBASIC20.15■□□□□ 0.82
PRAMEP78395 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEP78395 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRAMEP78395 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.14■□□□□ 0.82
PRAMEP78395 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PRAMEP78395 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEP78395 MIR663A-201ENST00000385250 93 ntBASIC20.14■□□□□ 0.81
PRAMEP78395 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.14■□□□□ 0.81
PRAMEP78395 AC133552.2-202ENST00000575694 574 ntBASIC20.14■□□□□ 0.81
PRAMEP78395 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.14■□□□□ 0.81
PRAMEP78395 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEP78395 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEP78395 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEP78395 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEP78395 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEP78395 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PRAMEP78395 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PRAMEP78395 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.13■□□□□ 0.81
PRAMEP78395 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PRAMEP78395 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEP78395 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEP78395 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEP78395 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEP78395 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEP78395 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEP78395 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEP78395 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms