Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TMEM179-206ENST00000616017 1645 ntBASIC17.51■□□□□ 0.39
HIST1H3AP68431 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 LSM12P1-201ENST00000411836 588 ntBASIC17.51■□□□□ 0.39
HIST1H3AP68431 KRT8P20-201ENST00000423953 1409 ntBASIC17.51■□□□□ 0.39
HIST1H3AP68431 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.51■□□□□ 0.39
HIST1H3AP68431 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HIST1H3AP68431 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST1H3AP68431 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST1H3AP68431 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H3AP68431 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HIST1H3AP68431 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST1H3AP68431 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST1H3AP68431 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST1H3AP68431 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.5■□□□□ 0.39
HIST1H3AP68431 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST1H3AP68431 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H3AP68431 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H3AP68431 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H3AP68431 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.48■□□□□ 0.39
HIST1H3AP68431 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 BX276092.2-201ENST00000417668 665 ntBASIC17.48■□□□□ 0.39
HIST1H3AP68431 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 AC083906.2-201ENST00000511578 360 ntBASIC17.48■□□□□ 0.39
HIST1H3AP68431 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 AL121832.2-201ENST00000610979 668 ntBASIC17.48■□□□□ 0.39
HIST1H3AP68431 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HIST1H3AP68431 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H3AP68431 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST1H3AP68431 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HIST1H3AP68431 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.47■□□□□ 0.39
HIST1H3AP68431 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.47■□□□□ 0.39
HIST1H3AP68431 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.47■□□□□ 0.39
HIST1H3AP68431 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HIST1H3AP68431 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HIST1H3AP68431 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H3AP68431 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms