Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SEC61A1P61619 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SEC61A1P61619 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SEC61A1P61619 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SEC61A1P61619 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SEC61A1P61619 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.46■□□□□ 0.39
SEC61A1P61619 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.46■□□□□ 0.39
SEC61A1P61619 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SEC61A1P61619 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.46■□□□□ 0.39
SEC61A1P61619 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SEC61A1P61619 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.46■□□□□ 0.39
SEC61A1P61619 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.46■□□□□ 0.39
SEC61A1P61619 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 POU5F1P4-201ENST00000413175 1085 ntBASIC17.46■□□□□ 0.39
SEC61A1P61619 AC120498.10-201ENST00000621827 505 ntBASIC17.46■□□□□ 0.39
SEC61A1P61619 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SEC61A1P61619 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SEC61A1P61619 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SEC61A1P61619 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SEC61A1P61619 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.46■□□□□ 0.39
SEC61A1P61619 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SEC61A1P61619 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SEC61A1P61619 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SEC61A1P61619 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.45■□□□□ 0.38
SEC61A1P61619 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.45■□□□□ 0.38
SEC61A1P61619 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.45■□□□□ 0.38
SEC61A1P61619 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SEC61A1P61619 NCF1B-203ENST00000435988 1254 ntBASIC17.45■□□□□ 0.38
SEC61A1P61619 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.45■□□□□ 0.38
SEC61A1P61619 SLC7A5P1-201ENST00000568957 537 ntBASIC17.45■□□□□ 0.38
SEC61A1P61619 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.45■□□□□ 0.38
SEC61A1P61619 AC104771.1-201ENST00000603335 964 ntBASIC17.45■□□□□ 0.38
SEC61A1P61619 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SEC61A1P61619 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 LETM1P2-201ENST00000597330 2178 ntBASIC17.45■□□□□ 0.38
SEC61A1P61619 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SEC61A1P61619 AC112907.3-201ENST00000577781 2400 ntBASIC17.45■□□□□ 0.38
SEC61A1P61619 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SEC61A1P61619 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.44■□□□□ 0.38
SEC61A1P61619 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 TERF1P5-201ENST00000477545 1207 ntBASIC17.44■□□□□ 0.38
SEC61A1P61619 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 AL109923.1-201ENST00000618799 583 ntBASIC17.44■□□□□ 0.38
SEC61A1P61619 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.44■□□□□ 0.38
SEC61A1P61619 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEC61A1P61619 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.43■□□□□ 0.38
SEC61A1P61619 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 PLK5-205ENST00000642079 1969 ntBASIC17.43■□□□□ 0.38
SEC61A1P61619 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.43■□□□□ 0.38
SEC61A1P61619 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.43■□□□□ 0.38
SEC61A1P61619 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.43■□□□□ 0.38
SEC61A1P61619 AC116562.4-201ENST00000641316 2276 ntBASIC17.43■□□□□ 0.38
SEC61A1P61619 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms