Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KRT87P-202ENST00000534226 1464 ntBASIC17.39■□□□□ 0.37
CLDN12P56749 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN12P56749 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDN12P56749 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDN12P56749 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN12P56749 AP001330.3-201ENST00000520123 633 ntBASIC17.39■□□□□ 0.37
CLDN12P56749 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CLDN12P56749 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN12P56749 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDN12P56749 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CLDN12P56749 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN12P56749 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN12P56749 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN12P56749 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN12P56749 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN12P56749 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.38■□□□□ 0.37
CLDN12P56749 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN12P56749 PBX2P1-201ENST00000493219 1291 ntBASIC17.38■□□□□ 0.37
CLDN12P56749 AC079140.4-201ENST00000507448 529 ntBASIC17.38■□□□□ 0.37
CLDN12P56749 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN12P56749 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN12P56749 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 KRT8P36-201ENST00000489121 1440 ntBASIC17.38■□□□□ 0.37
CLDN12P56749 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN12P56749 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN12P56749 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.37■□□□□ 0.37
CLDN12P56749 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN12P56749 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.37■□□□□ 0.37
CLDN12P56749 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.37■□□□□ 0.37
CLDN12P56749 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN12P56749 AC120498.10-201ENST00000621827 505 ntBASIC17.37■□□□□ 0.37
CLDN12P56749 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN12P56749 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLDN12P56749 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLDN12P56749 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN12P56749 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLDN12P56749 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN12P56749 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN12P56749 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN12P56749 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN12P56749 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.36■□□□□ 0.37
CLDN12P56749 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 AC138907.5-202ENST00000569484 235 ntBASIC17.36■□□□□ 0.37
CLDN12P56749 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN12P56749 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDN12P56749 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN12P56749 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDN12P56749 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN12P56749 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN12P56749 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN12P56749 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms