Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
WNT3AP56704 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
WNT3AP56704 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.26■□□□□ 0.83
WNT3AP56704 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
WNT3AP56704 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.26■□□□□ 0.83
WNT3AP56704 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.26■□□□□ 0.83
WNT3AP56704 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.26■□□□□ 0.83
WNT3AP56704 AC091874.3-201ENST00000512672 1195 ntBASIC20.26■□□□□ 0.83
WNT3AP56704 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
WNT3AP56704 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
WNT3AP56704 AC104771.1-201ENST00000603335 964 ntBASIC20.26■□□□□ 0.83
WNT3AP56704 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
WNT3AP56704 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
WNT3AP56704 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
WNT3AP56704 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 KRT8P20-201ENST00000423953 1409 ntBASIC20.26■□□□□ 0.83
WNT3AP56704 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
WNT3AP56704 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
WNT3AP56704 AC098934.4-201ENST00000564127 592 ntBASIC20.25■□□□□ 0.83
WNT3AP56704 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.25■□□□□ 0.83
WNT3AP56704 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
WNT3AP56704 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
WNT3AP56704 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
WNT3AP56704 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
WNT3AP56704 AL691432.2-201ENST00000607222 2038 ntBASIC20.24■□□□□ 0.83
WNT3AP56704 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
WNT3AP56704 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.24■□□□□ 0.83
WNT3AP56704 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
WNT3AP56704 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WNT3AP56704 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.24■□□□□ 0.83
WNT3AP56704 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.24■□□□□ 0.83
WNT3AP56704 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WNT3AP56704 AC023632.3-201ENST00000521633 145 ntBASIC20.24■□□□□ 0.83
WNT3AP56704 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.24■□□□□ 0.83
WNT3AP56704 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.24■□□□□ 0.83
WNT3AP56704 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.24■□□□□ 0.83
WNT3AP56704 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.24■□□□□ 0.83
WNT3AP56704 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.24■□□□□ 0.83
WNT3AP56704 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.24■□□□□ 0.83
WNT3AP56704 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WNT3AP56704 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.24■□□□□ 0.83
WNT3AP56704 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
WNT3AP56704 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WNT3AP56704 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WNT3AP56704 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.23■□□□□ 0.83
WNT3AP56704 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.23■□□□□ 0.83
WNT3AP56704 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.23■□□□□ 0.83
WNT3AP56704 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
WNT3AP56704 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.23■□□□□ 0.83
WNT3AP56704 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.23■□□□□ 0.83
WNT3AP56704 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.23■□□□□ 0.83
WNT3AP56704 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.23■□□□□ 0.83
WNT3AP56704 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
WNT3AP56704 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.23■□□□□ 0.83
WNT3AP56704 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.23■□□□□ 0.83
WNT3AP56704 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.23■□□□□ 0.83
WNT3AP56704 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
WNT3AP56704 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT3AP56704 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
WNT3AP56704 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.22■□□□□ 0.83
WNT3AP56704 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.22■□□□□ 0.83
WNT3AP56704 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
WNT3AP56704 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
WNT3AP56704 HLA-G-202ENST00000376815 851 ntBASIC20.22■□□□□ 0.83
WNT3AP56704 HLA-G-203ENST00000376818 1127 ntBASIC20.22■□□□□ 0.83
WNT3AP56704 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms