Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 KRT17P3-201ENST00000420566 1262 ntBASIC14.93□□□□□ -0.02
CMC4P56277 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.93□□□□□ -0.02
CMC4P56277 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.93□□□□□ -0.02
CMC4P56277 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.93□□□□□ -0.02
CMC4P56277 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.93□□□□□ -0.02
CMC4P56277 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.93□□□□□ -0.02
CMC4P56277 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.93□□□□□ -0.02
CMC4P56277 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 AC020907.5-201ENST00000624372 1936 ntBASIC14.93□□□□□ -0.02
CMC4P56277 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.93□□□□□ -0.02
CMC4P56277 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMC4P56277 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.93□□□□□ -0.02
CMC4P56277 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CMC4P56277 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.92□□□□□ -0.02
CMC4P56277 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CMC4P56277 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.92□□□□□ -0.02
CMC4P56277 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.92□□□□□ -0.02
CMC4P56277 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.92□□□□□ -0.02
CMC4P56277 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.92□□□□□ -0.02
CMC4P56277 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.92□□□□□ -0.02
CMC4P56277 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.92□□□□□ -0.02
CMC4P56277 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.92□□□□□ -0.02
CMC4P56277 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.92□□□□□ -0.02
CMC4P56277 UNC93B5-201ENST00000530315 699 ntBASIC14.92□□□□□ -0.02
CMC4P56277 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.92□□□□□ -0.02
CMC4P56277 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CMC4P56277 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 GABARAPL3-202ENST00000624044 1851 ntBASIC14.92□□□□□ -0.02
CMC4P56277 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
CMC4P56277 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMC4P56277 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMC4P56277 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMC4P56277 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMC4P56277 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMC4P56277 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.91□□□□□ -0.02
CMC4P56277 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CMC4P56277 UNC93B4-201ENST00000505679 747 ntBASIC14.91□□□□□ -0.02
CMC4P56277 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.91□□□□□ -0.02
CMC4P56277 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.91□□□□□ -0.02
CMC4P56277 AC098934.4-201ENST00000564127 592 ntBASIC14.91□□□□□ -0.02
CMC4P56277 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.91□□□□□ -0.02
CMC4P56277 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.91□□□□□ -0.02
CMC4P56277 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CMC4P56277 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.91□□□□□ -0.02
CMC4P56277 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CMC4P56277 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.91□□□□□ -0.02
CMC4P56277 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMC4P56277 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC14.9□□□□□ -0.02
CMC4P56277 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CMC4P56277 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.9□□□□□ -0.02
CMC4P56277 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CMC4P56277 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.9□□□□□ -0.02
CMC4P56277 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CMC4P56277 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.9□□□□□ -0.02
CMC4P56277 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.9□□□□□ -0.02
CMC4P56277 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 FAM201B-201ENST00000458407 597 ntBASIC14.9□□□□□ -0.02
CMC4P56277 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.9□□□□□ -0.02
CMC4P56277 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.9□□□□□ -0.02
CMC4P56277 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.9□□□□□ -0.02
CMC4P56277 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMC4P56277 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.89□□□□□ -0.03
CMC4P56277 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms