Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXG1P55316 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXG1P55316 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXG1P55316 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FOXG1P55316 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXG1P55316 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.59■□□□□ 0.41
FOXG1P55316 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXG1P55316 TMEM191A-211ENST00000637163 1067 ntBASIC17.59■□□□□ 0.41
FOXG1P55316 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
FOXG1P55316 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
FOXG1P55316 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXG1P55316 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXG1P55316 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
FOXG1P55316 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXG1P55316 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
FOXG1P55316 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
FOXG1P55316 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FOXG1P55316 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.58■□□□□ 0.41
FOXG1P55316 KRT8P20-201ENST00000423953 1409 ntBASIC17.58■□□□□ 0.41
FOXG1P55316 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.58■□□□□ 0.41
FOXG1P55316 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXG1P55316 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXG1P55316 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXG1P55316 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXG1P55316 KRT18P29-201ENST00000397031 1267 ntBASIC17.58■□□□□ 0.4
FOXG1P55316 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXG1P55316 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXG1P55316 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXG1P55316 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXG1P55316 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXG1P55316 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXG1P55316 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXG1P55316 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXG1P55316 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FOXG1P55316 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXG1P55316 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXG1P55316 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXG1P55316 AL162377.1-201ENST00000618844 1793 ntBASIC17.58■□□□□ 0.4
FOXG1P55316 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXG1P55316 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FOXG1P55316 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXG1P55316 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXG1P55316 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXG1P55316 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXG1P55316 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
FOXG1P55316 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXG1P55316 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
FOXG1P55316 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXG1P55316 POM121L13P-201ENST00000422362 380 ntBASIC17.57■□□□□ 0.4
FOXG1P55316 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.57■□□□□ 0.4
FOXG1P55316 RPS2P52-201ENST00000469610 820 ntBASIC17.57■□□□□ 0.4
FOXG1P55316 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXG1P55316 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXG1P55316 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.57■□□□□ 0.4
FOXG1P55316 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXG1P55316 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.57■□□□□ 0.4
FOXG1P55316 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXG1P55316 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXG1P55316 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXG1P55316 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.57■□□□□ 0.4
FOXG1P55316 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXG1P55316 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXG1P55316 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXG1P55316 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.56■□□□□ 0.4
FOXG1P55316 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
FOXG1P55316 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXG1P55316 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
FOXG1P55316 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXG1P55316 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
FOXG1P55316 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.56■□□□□ 0.4
FOXG1P55316 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXG1P55316 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXG1P55316 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXG1P55316 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
FOXG1P55316 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXG1P55316 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXG1P55316 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms