Protein–RNA interactions for Protein: P54999

SMX3, Small nuclear ribonucleoprotein F, yeastyeast

Predicted RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMX3P54999 PMP2YEL017C-A 132 nt1.71□□□□□ -2.14
SMX3P54999 YBR099CYBR099C 384 nt1.71□□□□□ -2.14
SMX3P54999 RAD50YNL250W 3939 nt1.71□□□□□ -2.14
SMX3P54999 YDR544CYDR544C 429 nt1.7□□□□□ -2.14
SMX3P54999 CMC4YMR194C-B 222 nt1.7□□□□□ -2.14
SMX3P54999 LHS1YKL073W 2646 nt1.69□□□□□ -2.14
SMX3P54999 YCR095W-AYCR095W-A 159 nt1.69□□□□□ -2.14
SMX3P54999 YNL103W-AYNL103W-A 90 nt1.69□□□□□ -2.14
SMX3P54999 IRA1YBR140C 9279 nt1.69□□□□□ -2.14
SMX3P54999 RTP1YMR185W 2946 nt1.68□□□□□ -2.14
SMX3P54999 YAL067W-AYAL067W-A 228 nt1.68□□□□□ -2.14
SMX3P54999 YMR326CYMR326C 309 nt1.68□□□□□ -2.14
SMX3P54999 NUP157YER105C 4176 nt1.67□□□□□ -2.14
SMX3P54999 COA6YMR244C-A 315 nt1.67□□□□□ -2.14
SMX3P54999 MEC1YBR136W 7107 nt1.67□□□□□ -2.14
SMX3P54999 CHS6YJL099W 2241 nt1.67□□□□□ -2.14
SMX3P54999 GCN2YDR283C 4980 nt1.67□□□□□ -2.14
SMX3P54999 YGL123C-AYGL123C-A 231 nt1.66□□□□□ -2.14
SMX3P54999 TMA7YLR262C-A 195 nt1.66□□□□□ -2.14
SMX3P54999 UTP8YGR128C 2142 nt1.66□□□□□ -2.14
SMX3P54999 UFD2YDL190C 2886 nt1.65□□□□□ -2.14
SMX3P54999 GYP5YPL249C 2685 nt1.65□□□□□ -2.14
SMX3P54999 tC(GCA)BtC(GCA)B 72 nt1.65□□□□□ -2.15
SMX3P54999 tC(GCA)GtC(GCA)G 72 nt1.65□□□□□ -2.15
SMX3P54999 tC(GCA)P1tC(GCA)P1 72 nt1.65□□□□□ -2.15
SMX3P54999 tC(GCA)P2tC(GCA)P2 72 nt1.65□□□□□ -2.15
SMX3P54999 YGL182CYGL182C 324 nt1.65□□□□□ -2.15
SMX3P54999 YMR247W-AYMR247W-A 144 nt1.65□□□□□ -2.15
SMX3P54999 SMC4YLR086W 4257 nt1.64□□□□□ -2.15
SMX3P54999 OST4YDL232W 111 nt1.64□□□□□ -2.15
SMX3P54999 NUT1YGL151W 3399 nt1.64□□□□□ -2.15
SMX3P54999 MYO2YOR326W 4725 nt1.64□□□□□ -2.15
SMX3P54999 NAB6YML117W 3405 nt1.63□□□□□ -2.15
SMX3P54999 PDR8YLR266C 2106 nt1.63□□□□□ -2.15
SMX3P54999 EMC5YIL027C 426 nt1.63□□□□□ -2.15
SMX3P54999 YOR161W-AYOR161W-A 81 nt1.63□□□□□ -2.15
SMX3P54999 snR14snR14 160 nt1.63□□□□□ -2.15
SMX3P54999 SLX4YLR135W 2247 nt1.63□□□□□ -2.15
SMX3P54999 SMC1YFL008W 3678 nt1.62□□□□□ -2.15
SMX3P54999 YJR039WYJR039W 3366 nt1.62□□□□□ -2.15
SMX3P54999 YHR214C-BYHR214C-B 5382 nt1.62□□□□□ -2.15
SMX3P54999 RSM22YKL155C 1887 nt1.62□□□□□ -2.15
SMX3P54999 BFR2YDR299W 1605 nt1.62□□□□□ -2.15
SMX3P54999 MMS4YBR098W 2076 nt1.62□□□□□ -2.15
SMX3P54999 MON2YNL297C 4911 nt1.62□□□□□ -2.15
SMX3P54999 PEP1YBL017C 4740 nt1.61□□□□□ -2.15
SMX3P54999 MGA2YIR033W 3342 nt1.61□□□□□ -2.15
SMX3P54999 SOM1YEL059C-A 225 nt1.61□□□□□ -2.15
SMX3P54999 tT(UGU)HtT(UGU)H 72 nt1.61□□□□□ -2.15
SMX3P54999 KIP1YBL063W 3336 nt1.61□□□□□ -2.15
SMX3P54999 POL5YEL055C 3069 nt1.6□□□□□ -2.15
SMX3P54999 YLL020CYLL020C 306 nt1.6□□□□□ -2.15
SMX3P54999 YBL039C-AYBL039C-A 84 nt1.6□□□□□ -2.15
SMX3P54999 YNL067W-BYNL067W-B 141 nt1.6□□□□□ -2.15
SMX3P54999 YAR009CYAR009C 3591 nt1.59□□□□□ -2.15
SMX3P54999 STB6YKL072W 2301 nt1.59□□□□□ -2.15
SMX3P54999 ATG9YDL149W 2994 nt1.59□□□□□ -2.15
SMX3P54999 YLR282CYLR282C 342 nt1.59□□□□□ -2.15
SMX3P54999 ALY2YJL084C 3141 nt1.58□□□□□ -2.16
SMX3P54999 QCR9YGR183C 201 nt1.58□□□□□ -2.16
SMX3P54999 YHR217CYHR217C 462 nt1.58□□□□□ -2.16
SMX3P54999 YPP1YGR198W 2454 nt1.58□□□□□ -2.16
SMX3P54999 snR61snR61 90 nt1.57□□□□□ -2.16
SMX3P54999 YKL100W-AYKL100W-A 90 nt1.57□□□□□ -2.16
SMX3P54999 TRM3YDL112W 4311 nt1.57□□□□□ -2.16
SMX3P54999 PAN2YGL094C 3348 nt1.56□□□□□ -2.16
SMX3P54999 TAH1YCR060W 336 nt1.56□□□□□ -2.16
SMX3P54999 COX5BYIL111W 456 nt1.56□□□□□ -2.16
SMX3P54999 SIR4YDR227W 4077 nt1.56□□□□□ -2.16
SMX3P54999 VPS15YBR097W 4365 nt1.54□□□□□ -2.16
SMX3P54999 EAF1YDR359C 2949 nt1.53□□□□□ -2.16
SMX3P54999 SKI3YPR189W 4299 nt1.53□□□□□ -2.16
SMX3P54999 YHR131W-AYHR131W-A 246 nt1.53□□□□□ -2.16
SMX3P54999 TBS1YBR150C 3285 nt1.53□□□□□ -2.16
SMX3P54999 snR39BsnR39B 96 nt1.53□□□□□ -2.16
SMX3P54999 STO1YMR125W 2586 nt1.53□□□□□ -2.17
SMX3P54999 PMD1YER132C 5262 nt1.52□□□□□ -2.17
SMX3P54999 GEA2YEL022W 4380 nt1.52□□□□□ -2.17
SMX3P54999 YML002WYML002W 2214 nt1.52□□□□□ -2.17
SMX3P54999 TDA9YML081W 3756 nt1.52□□□□□ -2.17
SMX3P54999 SEC21YNL287W 2808 nt1.52□□□□□ -2.17
SMX3P54999 CFT1YDR301W 4074 nt1.51□□□□□ -2.17
SMX3P54999 KAP122YGL016W 3246 nt1.5□□□□□ -2.17
SMX3P54999 SET3YKR029C 2256 nt1.5□□□□□ -2.17
SMX3P54999 YDL247W-AYDL247W-A 75 nt1.49□□□□□ -2.17
SMX3P54999 YMR272W-BYMR272W-B 108 nt1.49□□□□□ -2.17
SMX3P54999 YOL019W-AYOL019W-A 153 nt1.49□□□□□ -2.17
SMX3P54999 NOP9YJL010C 2001 nt1.49□□□□□ -2.17
SMX3P54999 IRC20YLR247C 4671 nt1.48□□□□□ -2.17
SMX3P54999 WAR1YML076C 2835 nt1.48□□□□□ -2.17
SMX3P54999 FYV10YIL097W 1551 nt1.47□□□□□ -2.17
SMX3P54999 YGL041C-BYGL041C-B 183 nt1.47□□□□□ -2.17
SMX3P54999 BRR2YER172C 6492 nt1.47□□□□□ -2.17
SMX3P54999 tM(CAU)Q2tM(CAU)Q2 78 nt1.46□□□□□ -2.18
SMX3P54999 STF2YGR008C 255 nt1.46□□□□□ -2.18
SMX3P54999 PKH3YDR466W 2697 nt1.46□□□□□ -2.18
SMX3P54999 KCS1YDR017C 3153 nt1.46□□□□□ -2.18
SMX3P54999 SBH1YER087C-B 249 nt1.45□□□□□ -2.18
SMX3P54999 snR190snR190 190 nt1.45□□□□□ -2.18
SMX3P54999 YLR041WYLR041W 321 nt1.44□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms