Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.64■□□□□ 0.89
PMS2P54278 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PMS2P54278 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.64■□□□□ 0.89
PMS2P54278 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.64■□□□□ 0.89
PMS2P54278 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PMS2P54278 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.64■□□□□ 0.89
PMS2P54278 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.64■□□□□ 0.89
PMS2P54278 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.63■□□□□ 0.89
PMS2P54278 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.63■□□□□ 0.89
PMS2P54278 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.63■□□□□ 0.89
PMS2P54278 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.63■□□□□ 0.89
PMS2P54278 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.63■□□□□ 0.89
PMS2P54278 TREX1-205ENST00000625293 1783 ntBASIC20.63■□□□□ 0.89
PMS2P54278 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 BX119927.1-201ENST00000636596 1552 ntBASIC20.63■□□□□ 0.89
PMS2P54278 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.63■□□□□ 0.89
PMS2P54278 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS2P54278 KRT16P2-201ENST00000414673 1423 ntBASIC20.62■□□□□ 0.89
PMS2P54278 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PMS2P54278 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
PMS2P54278 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.62■□□□□ 0.89
PMS2P54278 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
PMS2P54278 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.62■□□□□ 0.89
PMS2P54278 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.62■□□□□ 0.89
PMS2P54278 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PMS2P54278 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PMS2P54278 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS2P54278 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS2P54278 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS2P54278 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS2P54278 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PMS2P54278 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS2P54278 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS2P54278 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS2P54278 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS2P54278 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.61■□□□□ 0.89
PMS2P54278 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PMS2P54278 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMS2P54278 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS2P54278 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS2P54278 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMS2P54278 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PMS2P54278 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.6■□□□□ 0.89
PMS2P54278 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
PMS2P54278 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PMS2P54278 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PMS2P54278 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.6■□□□□ 0.89
PMS2P54278 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.6■□□□□ 0.89
PMS2P54278 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMS2P54278 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
PMS2P54278 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.59■□□□□ 0.89
PMS2P54278 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PMS2P54278 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.59■□□□□ 0.89
PMS2P54278 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PMS2P54278 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PMS2P54278 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PMS2P54278 KRT8P36-201ENST00000489121 1440 ntBASIC20.59■□□□□ 0.89
PMS2P54278 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PMS2P54278 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms