Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HCFC1P51610 AC005521.1-201ENST00000393351 872 ntBASIC17.54■□□□□ 0.4
HCFC1P51610 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.54■□□□□ 0.4
HCFC1P51610 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC1P51610 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HCFC1P51610 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC1P51610 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HCFC1P51610 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC1P51610 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC1P51610 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC1P51610 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.54■□□□□ 0.4
HCFC1P51610 C2orf69P3-201ENST00000565542 1120 ntBASIC17.54■□□□□ 0.4
HCFC1P51610 AC073195.1-201ENST00000607241 877 ntBASIC17.54■□□□□ 0.4
HCFC1P51610 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC1P51610 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.53■□□□□ 0.4
HCFC1P51610 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
HCFC1P51610 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC1P51610 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC1P51610 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HCFC1P51610 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC1P51610 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC1P51610 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC1P51610 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC1P51610 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC1P51610 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC1P51610 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCFC1P51610 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCFC1P51610 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCFC1P51610 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HCFC1P51610 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.52■□□□□ 0.4
HCFC1P51610 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HCFC1P51610 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.52■□□□□ 0.4
HCFC1P51610 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCFC1P51610 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.52■□□□□ 0.4
HCFC1P51610 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.52■□□□□ 0.39
HCFC1P51610 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HCFC1P51610 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HCFC1P51610 NIFKP9-201ENST00000419265 221 ntBASIC17.52■□□□□ 0.39
HCFC1P51610 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.52■□□□□ 0.39
HCFC1P51610 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.52■□□□□ 0.39
HCFC1P51610 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCFC1P51610 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.51■□□□□ 0.39
HCFC1P51610 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HCFC1P51610 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCFC1P51610 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
HCFC1P51610 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCFC1P51610 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.51■□□□□ 0.39
HCFC1P51610 KRT18P57-201ENST00000443599 1254 ntBASIC17.51■□□□□ 0.39
HCFC1P51610 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCFC1P51610 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCFC1P51610 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HCFC1P51610 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HCFC1P51610 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HCFC1P51610 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HCFC1P51610 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
HCFC1P51610 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC1P51610 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.5■□□□□ 0.39
HCFC1P51610 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HCFC1P51610 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HCFC1P51610 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.5■□□□□ 0.39
HCFC1P51610 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HCFC1P51610 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC1P51610 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC1P51610 AC004264.1-201ENST00000608354 794 ntBASIC17.5■□□□□ 0.39
HCFC1P51610 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC1P51610 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.5■□□□□ 0.39
HCFC1P51610 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC1P51610 CYP2D8P-201ENST00000433633 1490 ntBASIC17.49■□□□□ 0.39
HCFC1P51610 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.49■□□□□ 0.39
HCFC1P51610 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.49■□□□□ 0.39
HCFC1P51610 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC1P51610 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC1P51610 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC1P51610 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC1P51610 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC1P51610 AC011484.1-201ENST00000377652 1995 ntBASIC17.49■□□□□ 0.39
HCFC1P51610 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms