Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.4■□□□□ 0.54
SSR4P51571 AC093827.2-201ENST00000512654 315 ntBASIC18.4■□□□□ 0.54
SSR4P51571 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.4■□□□□ 0.54
SSR4P51571 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.4■□□□□ 0.54
SSR4P51571 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR4P51571 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR4P51571 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSR4P51571 AL023875.1-201ENST00000640777 796 ntBASIC18.4■□□□□ 0.54
SSR4P51571 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR4P51571 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR4P51571 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR4P51571 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SSR4P51571 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR4P51571 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR4P51571 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR4P51571 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSR4P51571 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSR4P51571 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSR4P51571 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSR4P51571 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SSR4P51571 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.39■□□□□ 0.53
SSR4P51571 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.39■□□□□ 0.53
SSR4P51571 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SSR4P51571 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.39■□□□□ 0.53
SSR4P51571 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.39■□□□□ 0.53
SSR4P51571 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.39■□□□□ 0.53
SSR4P51571 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.39■□□□□ 0.53
SSR4P51571 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.39■□□□□ 0.53
SSR4P51571 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.39■□□□□ 0.53
SSR4P51571 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.39■□□□□ 0.53
SSR4P51571 AL121829.2-201ENST00000620908 328 ntBASIC18.39■□□□□ 0.53
SSR4P51571 AL121906.2-201ENST00000621597 723 ntBASIC18.39■□□□□ 0.53
SSR4P51571 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.39■□□□□ 0.53
SSR4P51571 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SSR4P51571 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSR4P51571 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSR4P51571 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SSR4P51571 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SSR4P51571 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSR4P51571 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.38■□□□□ 0.53
SSR4P51571 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.38■□□□□ 0.53
SSR4P51571 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.38■□□□□ 0.53
SSR4P51571 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.38■□□□□ 0.53
SSR4P51571 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SSR4P51571 AC124283.5-201ENST00000624661 1809 ntBASIC18.38■□□□□ 0.53
SSR4P51571 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.38■□□□□ 0.53
SSR4P51571 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.38■□□□□ 0.53
SSR4P51571 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.38■□□□□ 0.53
SSR4P51571 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.38■□□□□ 0.53
SSR4P51571 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.38■□□□□ 0.53
SSR4P51571 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.38■□□□□ 0.53
SSR4P51571 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SSR4P51571 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.38■□□□□ 0.53
SSR4P51571 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSR4P51571 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR4P51571 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR4P51571 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SSR4P51571 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSR4P51571 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
SSR4P51571 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSR4P51571 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
SSR4P51571 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.37■□□□□ 0.53
SSR4P51571 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.37■□□□□ 0.53
SSR4P51571 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSR4P51571 KRT16P6-202ENST00000425692 1426 ntBASIC18.37■□□□□ 0.53
SSR4P51571 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.37■□□□□ 0.53
SSR4P51571 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR4P51571 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR4P51571 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR4P51571 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.37■□□□□ 0.53
SSR4P51571 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR4P51571 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SSR4P51571 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR4P51571 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR4P51571 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SSR4P51571 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR4P51571 KRASP1-201ENST00000407852 552 ntBASIC18.36■□□□□ 0.53
SSR4P51571 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR4P51571 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.36■□□□□ 0.53
SSR4P51571 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR4P51571 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.36■□□□□ 0.53
SSR4P51571 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SSR4P51571 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.36■□□□□ 0.53
SSR4P51571 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SSR4P51571 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.36■□□□□ 0.53
SSR4P51571 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SSR4P51571 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.36■□□□□ 0.53
SSR4P51571 AC124016.1-201ENST00000609552 612 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms