Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CNN2P6-201ENST00000439038 900 ntBASIC19.39■□□□□ 0.69
KRT6CP48668 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT6CP48668 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.39■□□□□ 0.69
KRT6CP48668 AC011767.1-201ENST00000617410 1153 ntBASIC19.39■□□□□ 0.69
KRT6CP48668 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6CP48668 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6CP48668 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.39■□□□□ 0.69
KRT6CP48668 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
KRT6CP48668 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
KRT6CP48668 AC068338.2-201ENST00000563278 1430 ntBASIC19.39■□□□□ 0.69
KRT6CP48668 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT6CP48668 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT6CP48668 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT6CP48668 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6CP48668 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6CP48668 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6CP48668 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6CP48668 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
KRT6CP48668 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6CP48668 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6CP48668 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KRT6CP48668 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
KRT6CP48668 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.38■□□□□ 0.69
KRT6CP48668 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6CP48668 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.38■□□□□ 0.69
KRT6CP48668 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6CP48668 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6CP48668 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6CP48668 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6CP48668 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6CP48668 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT6CP48668 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6CP48668 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.38■□□□□ 0.69
KRT6CP48668 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6CP48668 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6CP48668 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT6CP48668 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6CP48668 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT6CP48668 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
KRT6CP48668 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT6CP48668 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KRT6CP48668 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.37■□□□□ 0.69
KRT6CP48668 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
KRT6CP48668 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KRT6CP48668 AC069236.1-201ENST00000604339 616 ntBASIC19.37■□□□□ 0.69
KRT6CP48668 BID-214ENST00000617586 542 ntTSL 5 BASIC19.37■□□□□ 0.69
KRT6CP48668 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KRT6CP48668 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KRT6CP48668 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT6CP48668 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6CP48668 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT6CP48668 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6CP48668 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6CP48668 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT6CP48668 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.36■□□□□ 0.69
KRT6CP48668 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KRT6CP48668 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT6CP48668 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
KRT6CP48668 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT6CP48668 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6CP48668 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT6CP48668 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6CP48668 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KRT6CP48668 MIR5787-201ENST00000611784 55 ntBASIC19.36■□□□□ 0.69
KRT6CP48668 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT6CP48668 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6CP48668 AC008694.1-202ENST00000636953 945 ntBASIC19.36■□□□□ 0.69
KRT6CP48668 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6CP48668 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6CP48668 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT6CP48668 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KRT6CP48668 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6CP48668 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6CP48668 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6CP48668 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6CP48668 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6CP48668 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
KRT6CP48668 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6CP48668 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
KRT6CP48668 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
KRT6CP48668 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
KRT6CP48668 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6CP48668 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KRT6CP48668 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
KRT6CP48668 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.35■□□□□ 0.69
KRT6CP48668 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6CP48668 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6CP48668 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6CP48668 AC231657.2-201ENST00000624556 255 ntBASIC19.35■□□□□ 0.69
KRT6CP48668 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms