Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RPL3P39023 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.01■□□□□ 0.63
RPL3P39023 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
RPL3P39023 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 KRT16P6-202ENST00000425692 1426 ntBASIC19■□□□□ 0.63
RPL3P39023 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19■□□□□ 0.63
RPL3P39023 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RPL3P39023 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RPL3P39023 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
RPL3P39023 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19■□□□□ 0.63
RPL3P39023 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19■□□□□ 0.63
RPL3P39023 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19■□□□□ 0.63
RPL3P39023 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19■□□□□ 0.63
RPL3P39023 MIR5787-201ENST00000611784 55 ntBASIC19■□□□□ 0.63
RPL3P39023 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19■□□□□ 0.63
RPL3P39023 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19■□□□□ 0.63
RPL3P39023 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPL3P39023 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19■□□□□ 0.63
RPL3P39023 LBX2-AS1-202ENST00000603175 2083 ntBASIC19■□□□□ 0.63
RPL3P39023 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19■□□□□ 0.63
RPL3P39023 KRT8P17-201ENST00000453110 1448 ntBASIC19■□□□□ 0.63
RPL3P39023 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPL3P39023 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.99■□□□□ 0.63
RPL3P39023 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RPL3P39023 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
RPL3P39023 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 AC007322.1-201ENST00000426983 750 ntBASIC18.99■□□□□ 0.63
RPL3P39023 CYP2T1P-201ENST00000432607 1285 ntBASIC18.99■□□□□ 0.63
RPL3P39023 AL031963.3-201ENST00000606441 850 ntBASIC18.99■□□□□ 0.63
RPL3P39023 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.99■□□□□ 0.63
RPL3P39023 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.99■□□□□ 0.63
RPL3P39023 OR10C1-204ENST00000622521 1039 ntBASIC18.99■□□□□ 0.63
RPL3P39023 AL691432.2-201ENST00000607222 2038 ntBASIC18.99■□□□□ 0.63
RPL3P39023 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 KRT8P20-201ENST00000423953 1409 ntBASIC18.99■□□□□ 0.63
RPL3P39023 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RPL3P39023 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPL3P39023 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
RPL3P39023 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RPL3P39023 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.98■□□□□ 0.63
RPL3P39023 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RPL3P39023 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.98■□□□□ 0.63
RPL3P39023 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 CYP2T3P-201ENST00000601990 817 ntBASIC18.98■□□□□ 0.63
RPL3P39023 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.98■□□□□ 0.63
RPL3P39023 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPL3P39023 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPL3P39023 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.98■□□□□ 0.63
RPL3P39023 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPL3P39023 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.97■□□□□ 0.63
RPL3P39023 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
RPL3P39023 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPL3P39023 HLA-G-202ENST00000376815 851 ntBASIC18.97■□□□□ 0.63
RPL3P39023 HLA-G-203ENST00000376818 1127 ntBASIC18.97■□□□□ 0.63
RPL3P39023 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.97■□□□□ 0.63
RPL3P39023 AL589743.5-201ENST00000616611 1050 ntBASIC18.97■□□□□ 0.63
RPL3P39023 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.97■□□□□ 0.63
RPL3P39023 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPL3P39023 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RPL3P39023 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.97■□□□□ 0.63
RPL3P39023 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPL3P39023 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPL3P39023 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPL3P39023 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RPL3P39023 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPL3P39023 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPL3P39023 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.97■□□□□ 0.63
RPL3P39023 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms