Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGCLP35914 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGCLP35914 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGCLP35914 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCLP35914 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCLP35914 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HMGCLP35914 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCLP35914 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCLP35914 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.97■□□□□ 0.79
HMGCLP35914 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.97■□□□□ 0.79
HMGCLP35914 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCLP35914 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCLP35914 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.97■□□□□ 0.79
HMGCLP35914 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGCLP35914 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGCLP35914 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGCLP35914 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
HMGCLP35914 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
HMGCLP35914 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGCLP35914 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGCLP35914 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HMGCLP35914 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HMGCLP35914 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.96■□□□□ 0.79
HMGCLP35914 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGCLP35914 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.96■□□□□ 0.79
HMGCLP35914 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGCLP35914 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGCLP35914 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGCLP35914 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGCLP35914 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLP35914 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
HMGCLP35914 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
HMGCLP35914 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCLP35914 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HMGCLP35914 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HMGCLP35914 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.95■□□□□ 0.78
HMGCLP35914 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCLP35914 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.95■□□□□ 0.78
HMGCLP35914 UNC93B5-201ENST00000530315 699 ntBASIC19.95■□□□□ 0.78
HMGCLP35914 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HMGCLP35914 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.95■□□□□ 0.78
HMGCLP35914 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCLP35914 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
HMGCLP35914 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCLP35914 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCLP35914 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCLP35914 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLP35914 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HMGCLP35914 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
HMGCLP35914 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGCLP35914 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HMGCLP35914 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.94■□□□□ 0.78
HMGCLP35914 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGCLP35914 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
HMGCLP35914 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLP35914 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms