Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
PTPN7P35236 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN7P35236 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTPN7P35236 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN7P35236 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.72■□□□□ 0.91
PTPN7P35236 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN7P35236 AC069236.1-201ENST00000604339 616 ntBASIC20.72■□□□□ 0.91
PTPN7P35236 BID-214ENST00000617586 542 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPN7P35236 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN7P35236 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN7P35236 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN7P35236 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN7P35236 KRT8P20-201ENST00000423953 1409 ntBASIC20.71■□□□□ 0.91
PTPN7P35236 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN7P35236 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN7P35236 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN7P35236 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN7P35236 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PTPN7P35236 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN7P35236 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN7P35236 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN7P35236 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN7P35236 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN7P35236 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN7P35236 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPN7P35236 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTPN7P35236 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTPN7P35236 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.7■□□□□ 0.91
PTPN7P35236 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
PTPN7P35236 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PTPN7P35236 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPN7P35236 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.7■□□□□ 0.9
PTPN7P35236 OR10C1-204ENST00000622521 1039 ntBASIC20.7■□□□□ 0.9
PTPN7P35236 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
PTPN7P35236 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPN7P35236 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPN7P35236 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN7P35236 KRT16P6-202ENST00000425692 1426 ntBASIC20.7■□□□□ 0.9
PTPN7P35236 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN7P35236 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PTPN7P35236 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN7P35236 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.69■□□□□ 0.9
PTPN7P35236 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.69■□□□□ 0.9
PTPN7P35236 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN7P35236 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTPN7P35236 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN7P35236 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN7P35236 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN7P35236 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN7P35236 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPN7P35236 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPN7P35236 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPN7P35236 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTPN7P35236 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPN7P35236 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 AC007322.1-201ENST00000426983 750 ntBASIC20.68■□□□□ 0.9
PTPN7P35236 AL162430.1-201ENST00000480705 870 ntBASIC20.68■□□□□ 0.9
PTPN7P35236 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.68■□□□□ 0.9
PTPN7P35236 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.68■□□□□ 0.9
PTPN7P35236 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.68■□□□□ 0.9
PTPN7P35236 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.68■□□□□ 0.9
PTPN7P35236 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN7P35236 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.68■□□□□ 0.9
PTPN7P35236 AC008694.1-202ENST00000636953 945 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms