Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.64■□□□□ 0.57
GABRA3P34903 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GABRA3P34903 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 PTBP1P-201ENST00000554374 1601 ntBASIC18.63■□□□□ 0.57
GABRA3P34903 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
GABRA3P34903 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.63■□□□□ 0.57
GABRA3P34903 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.63■□□□□ 0.57
GABRA3P34903 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.63■□□□□ 0.57
GABRA3P34903 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.63■□□□□ 0.57
GABRA3P34903 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GABRA3P34903 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.63■□□□□ 0.57
GABRA3P34903 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA3P34903 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.62■□□□□ 0.57
GABRA3P34903 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
GABRA3P34903 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 GUSBP6-202ENST00000438529 1198 ntBASIC18.62■□□□□ 0.57
GABRA3P34903 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.62■□□□□ 0.57
GABRA3P34903 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.62■□□□□ 0.57
GABRA3P34903 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.62■□□□□ 0.57
GABRA3P34903 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GABRA3P34903 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.62■□□□□ 0.57
GABRA3P34903 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
GABRA3P34903 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA3P34903 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
GABRA3P34903 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GABRA3P34903 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GABRA3P34903 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.61■□□□□ 0.57
GABRA3P34903 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.61■□□□□ 0.57
GABRA3P34903 SLC25A24-204ENST00000569674 2357 ntBASIC18.61■□□□□ 0.57
GABRA3P34903 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
GABRA3P34903 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.61■□□□□ 0.57
GABRA3P34903 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GABRA3P34903 AIRN-201ENST00000601203 4374 ntBASIC18.61■□□□□ 0.57
GABRA3P34903 KRT8P17-201ENST00000453110 1448 ntBASIC18.61■□□□□ 0.57
GABRA3P34903 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.61■□□□□ 0.57
GABRA3P34903 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GABRA3P34903 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GABRA3P34903 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.61■□□□□ 0.57
GABRA3P34903 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.61■□□□□ 0.57
GABRA3P34903 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA3P34903 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.61■□□□□ 0.57
GABRA3P34903 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.61■□□□□ 0.57
GABRA3P34903 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA3P34903 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA3P34903 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRA3P34903 BX119927.1-201ENST00000636596 1552 ntBASIC18.6■□□□□ 0.57
GABRA3P34903 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA3P34903 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GABRA3P34903 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA3P34903 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA3P34903 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GABRA3P34903 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA3P34903 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms