Protein–RNA interactions for Protein: P31539

HSP104, Heat shock protein 104, yeastyeast

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HSP104P31539 tT(AGU)BtT(AGU)B 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)CtT(AGU)C 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)DtT(AGU)D 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)HtT(AGU)H 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)I1tT(AGU)I1 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)I2tT(AGU)I2 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)JtT(AGU)J 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)N1tT(AGU)N1 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)N2tT(AGU)N2 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)O1tT(AGU)O1 73 nt0.94□□□□□ -2.26
HSP104P31539 tT(AGU)O2tT(AGU)O2 73 nt0.94□□□□□ -2.26
HSP104P31539 YIL115W-AYIL115W-A 372 nt0.94□□□□□ -2.26
HSP104P31539 CMC4YMR194C-B 222 nt0.94□□□□□ -2.26
HSP104P31539 MCM10YIL150C 1716 nt0.93□□□□□ -2.26
HSP104P31539 OLI1Q0130 231 nt0.93□□□□□ -2.26
HSP104P31539 ECM12YHR021W-A 456 nt0.93□□□□□ -2.26
HSP104P31539 YOR011W-AYOR011W-A 207 nt0.93□□□□□ -2.26
HSP104P31539 DBP6YNR038W 1890 nt0.92□□□□□ -2.26
HSP104P31539 SEC1YDR164C 2175 nt0.91□□□□□ -2.26
HSP104P31539 YDL073WYDL073W 2955 nt0.91□□□□□ -2.26
HSP104P31539 YDR344CYDR344C 444 nt0.91□□□□□ -2.26
HSP104P31539 ISD11YER048W-A 285 nt0.9□□□□□ -2.27
HSP104P31539 IES4YOR189W 351 nt0.9□□□□□ -2.27
HSP104P31539 snR36snR36 182 nt0.9□□□□□ -2.27
HSP104P31539 PRP16YKR086W 3216 nt0.89□□□□□ -2.27
HSP104P31539 HTL1YCR020W-B 237 nt0.89□□□□□ -2.27
HSP104P31539 YDR183C-AYDR183C-A 258 nt0.89□□□□□ -2.27
HSP104P31539 ALG13YGL047W 609 nt0.89□□□□□ -2.27
HSP104P31539 COG8YML071C 1824 nt0.88□□□□□ -2.27
HSP104P31539 ATP6Q0085 780 nt0.88□□□□□ -2.27
HSP104P31539 BFR2YDR299W 1605 nt0.88□□□□□ -2.27
HSP104P31539 RKR1YMR247C 4689 nt0.88□□□□□ -2.27
HSP104P31539 NOP9YJL010C 2001 nt0.87□□□□□ -2.27
HSP104P31539 snR60snR60 104 nt0.86□□□□□ -2.27
HSP104P31539 YFL032WYFL032W 321 nt0.86□□□□□ -2.27
HSP104P31539 YPL044CYPL044C 549 nt0.86□□□□□ -2.27
HSP104P31539 SGF11YPL047W 300 nt0.86□□□□□ -2.27
HSP104P31539 YFL063WYFL063W 456 nt0.85□□□□□ -2.27
HSP104P31539 YIL032CYIL032C 357 nt0.85□□□□□ -2.27
HSP104P31539 YNL211CYNL211C 261 nt0.85□□□□□ -2.27
HSP104P31539 YOR282WYOR282W 321 nt0.85□□□□□ -2.27
HSP104P31539 ASE1YOR058C 2658 nt0.84□□□□□ -2.27
HSP104P31539 YKL118WYKL118W 312 nt0.84□□□□□ -2.27
HSP104P31539 VIK1YPL253C 1944 nt0.83□□□□□ -2.28
HSP104P31539 PMP1YCR024C-A 123 nt0.83□□□□□ -2.28
HSP104P31539 YDR413CYDR413C 576 nt0.83□□□□□ -2.28
HSP104P31539 YFR012W-AYFR012W-A 87 nt0.83□□□□□ -2.28
HSP104P31539 RPS27BYHR021C 249 nt0.83□□□□□ -2.28
HSP104P31539 TRS65YGR166W 1683 nt0.83□□□□□ -2.28
HSP104P31539 YER097WYER097W 330 nt0.82□□□□□ -2.28
HSP104P31539 YMR193C-AYMR193C-A 387 nt0.82□□□□□ -2.28
HSP104P31539 PAA1YDR071C 576 nt0.81□□□□□ -2.28
HSP104P31539 YGL149WYGL149W 306 nt0.81□□□□□ -2.28
HSP104P31539 YOR218CYOR218C 420 nt0.81□□□□□ -2.28
HSP104P31539 YDR524W-CYDR524W-C 90 nt0.78□□□□□ -2.28
HSP104P31539 YKL136WYKL136W 399 nt0.78□□□□□ -2.28
HSP104P31539 YDR354C-AYDR354C-A 144 nt0.77□□□□□ -2.29
HSP104P31539 STE5YDR103W 2754 nt0.76□□□□□ -2.29
HSP104P31539 RPL26BYGR034W 384 nt0.76□□□□□ -2.29
HSP104P31539 CSE2YNR010W 450 nt0.76□□□□□ -2.29
HSP104P31539 UTP8YGR128C 2142 nt0.76□□□□□ -2.29
HSP104P31539 YDL185C-AYDL185C-A 228 nt0.75□□□□□ -2.29
HSP104P31539 YHR063W-AYHR063W-A 336 nt0.75□□□□□ -2.29
HSP104P31539 RPL39YJL189W 156 nt0.75□□□□□ -2.29
HSP104P31539 CHS6YJL099W 2241 nt0.74□□□□□ -2.29
HSP104P31539 BIR1YJR089W 2865 nt0.74□□□□□ -2.29
HSP104P31539 NPR2YEL062W 1848 nt0.73□□□□□ -2.29
HSP104P31539 YAL067W-AYAL067W-A 228 nt0.73□□□□□ -2.29
HSP104P31539 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
HSP104P31539 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
HSP104P31539 ULP2YIL031W 3105 nt0.73□□□□□ -2.29
HSP104P31539 YJL026C-AYJL026C-A 222 nt0.72□□□□□ -2.29
HSP104P31539 YNL028WYNL028W 318 nt0.72□□□□□ -2.29
HSP104P31539 YOR015WYOR015W 360 nt0.72□□□□□ -2.29
HSP104P31539 YMR031W-AYMR031W-A 327 nt0.71□□□□□ -2.3
HSP104P31539 FMP27YLR454W 7887 nt0.7□□□□□ -2.3
HSP104P31539 RAD61YDR014W 1944 nt0.68□□□□□ -2.3
HSP104P31539 YML002WYML002W 2214 nt0.68□□□□□ -2.3
HSP104P31539 YCR018C-AYCR018C-A 255 nt0.68□□□□□ -2.3
HSP104P31539 YJL197C-AYJL197C-A 282 nt0.68□□□□□ -2.3
HSP104P31539 YLR120W-AYLR120W-A 102 nt0.68□□□□□ -2.3
HSP104P31539 YPR160W-AYPR160W-A 81 nt0.68□□□□□ -2.3
HSP104P31539 SEC8YPR055W 3198 nt0.68□□□□□ -2.3
HSP104P31539 FYV10YIL097W 1551 nt0.67□□□□□ -2.3
HSP104P31539 snR190snR190 190 nt0.67□□□□□ -2.3
HSP104P31539 LTE1YAL024C 4308 nt0.67□□□□□ -2.3
HSP104P31539 AI1Q0050 2505 nt0.67□□□□□ -2.3
HSP104P31539 YLL019W-AYLL019W-A 93 nt0.66□□□□□ -2.3
HSP104P31539 PRP5YBR237W 2550 nt0.65□□□□□ -2.3
HSP104P31539 YMR307C-AYMR307C-A 195 nt0.65□□□□□ -2.31
HSP104P31539 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
HSP104P31539 HAL9YOL089C 3093 nt0.63□□□□□ -2.31
HSP104P31539 YEL020C-BYEL020C-B 198 nt0.63□□□□□ -2.31
HSP104P31539 YLR399W-AYLR399W-A 105 nt0.63□□□□□ -2.31
HSP104P31539 COY1YKL179C 2040 nt0.62□□□□□ -2.31
HSP104P31539 YGR069WYGR069W 336 nt0.62□□□□□ -2.31
HSP104P31539 COX5BYIL111W 456 nt0.62□□□□□ -2.31
HSP104P31539 YLR282CYLR282C 342 nt0.62□□□□□ -2.31
HSP104P31539 YMR172C-AYMR172C-A 384 nt0.62□□□□□ -2.31
HSP104P31539 YNL277W-AYNL277W-A 189 nt0.62□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms