Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL8A2P25067 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL8A2P25067 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.93■□□□□ 0.3
COL8A2P25067 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.93■□□□□ 0.3
COL8A2P25067 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.93■□□□□ 0.3
COL8A2P25067 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
COL8A2P25067 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.93■□□□□ 0.3
COL8A2P25067 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.93■□□□□ 0.3
COL8A2P25067 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.93■□□□□ 0.3
COL8A2P25067 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.93■□□□□ 0.3
COL8A2P25067 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.93■□□□□ 0.3
COL8A2P25067 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.93■□□□□ 0.3
COL8A2P25067 AL023875.1-201ENST00000640777 796 ntBASIC16.93■□□□□ 0.3
COL8A2P25067 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.93■□□□□ 0.3
COL8A2P25067 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.93■□□□□ 0.3
COL8A2P25067 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL8A2P25067 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.93■□□□□ 0.3
COL8A2P25067 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 AC007225.1-201ENST00000566331 1836 ntBASIC16.92■□□□□ 0.3
COL8A2P25067 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.92■□□□□ 0.3
COL8A2P25067 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 RPS2P4-201ENST00000476944 856 ntBASIC16.92■□□□□ 0.3
COL8A2P25067 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.92■□□□□ 0.3
COL8A2P25067 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.92■□□□□ 0.3
COL8A2P25067 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
COL8A2P25067 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
COL8A2P25067 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL8A2P25067 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COL8A2P25067 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.92■□□□□ 0.3
COL8A2P25067 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL8A2P25067 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.91■□□□□ 0.3
COL8A2P25067 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.91■□□□□ 0.3
COL8A2P25067 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.91■□□□□ 0.3
COL8A2P25067 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.91■□□□□ 0.3
COL8A2P25067 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.91■□□□□ 0.3
COL8A2P25067 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.91■□□□□ 0.3
COL8A2P25067 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
COL8A2P25067 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.91■□□□□ 0.3
COL8A2P25067 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL8A2P25067 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL8A2P25067 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
COL8A2P25067 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL8A2P25067 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
COL8A2P25067 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL8A2P25067 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COL8A2P25067 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL8A2P25067 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.9■□□□□ 0.3
COL8A2P25067 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.9■□□□□ 0.3
COL8A2P25067 AC008550.1-201ENST00000511500 884 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms