Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.2■□□□□ 0.82
XPAP23025 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
XPAP23025 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.2■□□□□ 0.82
XPAP23025 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.2■□□□□ 0.82
XPAP23025 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.2■□□□□ 0.82
XPAP23025 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.2■□□□□ 0.82
XPAP23025 AC008403.3-201ENST00000598924 454 ntBASIC20.2■□□□□ 0.82
XPAP23025 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.2■□□□□ 0.82
XPAP23025 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
XPAP23025 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
XPAP23025 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
XPAP23025 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
XPAP23025 DPP3P2-201ENST00000416030 1696 ntBASIC20.19■□□□□ 0.82
XPAP23025 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.19■□□□□ 0.82
XPAP23025 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
XPAP23025 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.19■□□□□ 0.82
XPAP23025 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
XPAP23025 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
XPAP23025 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.19■□□□□ 0.82
XPAP23025 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.19■□□□□ 0.82
XPAP23025 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
XPAP23025 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
XPAP23025 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.19■□□□□ 0.82
XPAP23025 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.19■□□□□ 0.82
XPAP23025 AC073648.6-201ENST00000641589 218 ntBASIC20.19■□□□□ 0.82
XPAP23025 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
XPAP23025 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.19■□□□□ 0.82
XPAP23025 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.19■□□□□ 0.82
XPAP23025 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
XPAP23025 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
XPAP23025 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
XPAP23025 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.19■□□□□ 0.82
XPAP23025 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
XPAP23025 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
XPAP23025 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
XPAP23025 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
XPAP23025 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.18■□□□□ 0.82
XPAP23025 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
XPAP23025 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
XPAP23025 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
XPAP23025 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
XPAP23025 POM121L13P-201ENST00000422362 380 ntBASIC20.18■□□□□ 0.82
XPAP23025 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
XPAP23025 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
XPAP23025 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.18■□□□□ 0.82
XPAP23025 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.18■□□□□ 0.82
XPAP23025 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
XPAP23025 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.18■□□□□ 0.82
XPAP23025 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
XPAP23025 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XPAP23025 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.17■□□□□ 0.82
XPAP23025 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.17■□□□□ 0.82
XPAP23025 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.17■□□□□ 0.82
XPAP23025 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.17■□□□□ 0.82
XPAP23025 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.17■□□□□ 0.82
XPAP23025 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.17■□□□□ 0.82
XPAP23025 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.17■□□□□ 0.82
XPAP23025 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.17■□□□□ 0.82
XPAP23025 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.17■□□□□ 0.82
XPAP23025 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.17■□□□□ 0.82
XPAP23025 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XPAP23025 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
XPAP23025 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XPAP23025 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XPAP23025 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XPAP23025 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
XPAP23025 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
XPAP23025 KRT8P20-201ENST00000423953 1409 ntBASIC20.17■□□□□ 0.82
XPAP23025 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.17■□□□□ 0.82
XPAP23025 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
XPAP23025 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
XPAP23025 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
XPAP23025 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XPAP23025 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
XPAP23025 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
XPAP23025 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XPAP23025 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.16■□□□□ 0.82
XPAP23025 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
XPAP23025 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
XPAP23025 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
XPAP23025 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XPAP23025 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.16■□□□□ 0.82
XPAP23025 AC120498.8-201ENST00000614275 531 ntBASIC20.16■□□□□ 0.82
XPAP23025 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.16■□□□□ 0.82
XPAP23025 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XPAP23025 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
XPAP23025 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.16■□□□□ 0.82
XPAP23025 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
XPAP23025 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms