Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.1■□□□□ 0.97
MMP8P22894 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.1■□□□□ 0.97
MMP8P22894 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.1■□□□□ 0.97
MMP8P22894 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MMP8P22894 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MMP8P22894 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MMP8P22894 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP8P22894 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MMP8P22894 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.09■□□□□ 0.97
MMP8P22894 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP8P22894 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 SLC29A4P1-201ENST00000398760 971 ntBASIC21.09■□□□□ 0.97
MMP8P22894 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP8P22894 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.09■□□□□ 0.97
MMP8P22894 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
MMP8P22894 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.09■□□□□ 0.97
MMP8P22894 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.09■□□□□ 0.97
MMP8P22894 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MMP8P22894 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP8P22894 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP8P22894 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 KRT16P6-202ENST00000425692 1426 ntBASIC21.09■□□□□ 0.97
MMP8P22894 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
MMP8P22894 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MMP8P22894 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP8P22894 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP8P22894 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.08■□□□□ 0.97
MMP8P22894 TMEM179-206ENST00000616017 1645 ntBASIC21.08■□□□□ 0.97
MMP8P22894 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.08■□□□□ 0.97
MMP8P22894 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 DUSP5P2-201ENST00000426873 1033 ntBASIC21.08■□□□□ 0.97
MMP8P22894 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.08■□□□□ 0.97
MMP8P22894 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.08■□□□□ 0.97
MMP8P22894 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP8P22894 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.08■□□□□ 0.97
MMP8P22894 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.08■□□□□ 0.97
MMP8P22894 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MMP8P22894 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP8P22894 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MMP8P22894 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP8P22894 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP8P22894 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
MMP8P22894 AC125437.2-201ENST00000625180 2167 ntBASIC21.07■□□□□ 0.96
MMP8P22894 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
MMP8P22894 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP8P22894 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.07■□□□□ 0.96
MMP8P22894 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP8P22894 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP8P22894 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP8P22894 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.07■□□□□ 0.96
MMP8P22894 AC090192.1-201ENST00000517740 490 ntBASIC21.07■□□□□ 0.96
MMP8P22894 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.07■□□□□ 0.96
MMP8P22894 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.07■□□□□ 0.96
MMP8P22894 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.07■□□□□ 0.96
MMP8P22894 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
MMP8P22894 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP8P22894 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.07■□□□□ 0.96
MMP8P22894 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP8P22894 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP8P22894 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
MMP8P22894 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP8P22894 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.06■□□□□ 0.96
MMP8P22894 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP8P22894 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP8P22894 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP8P22894 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP8P22894 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP8P22894 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
MMP8P22894 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.06■□□□□ 0.96
MMP8P22894 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP8P22894 AC091874.3-201ENST00000512672 1195 ntBASIC21.06■□□□□ 0.96
MMP8P22894 MIR4758-201ENST00000577688 71 ntBASIC21.06■□□□□ 0.96
MMP8P22894 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.06■□□□□ 0.96
MMP8P22894 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.06■□□□□ 0.96
MMP8P22894 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP8P22894 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP8P22894 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.06■□□□□ 0.96
MMP8P22894 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
MMP8P22894 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP8P22894 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.05■□□□□ 0.96
MMP8P22894 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
MMP8P22894 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.05■□□□□ 0.96
MMP8P22894 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms