Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR4A1P22736 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.52■□□□□ 0.56
NR4A1P22736 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR4A1P22736 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR4A1P22736 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR4A1P22736 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR4A1P22736 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.52■□□□□ 0.56
NR4A1P22736 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.52■□□□□ 0.56
NR4A1P22736 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR4A1P22736 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NR4A1P22736 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NR4A1P22736 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.52■□□□□ 0.56
NR4A1P22736 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR4A1P22736 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.52■□□□□ 0.56
NR4A1P22736 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NR4A1P22736 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
NR4A1P22736 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.52■□□□□ 0.55
NR4A1P22736 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.52■□□□□ 0.55
NR4A1P22736 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NR4A1P22736 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NR4A1P22736 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.51■□□□□ 0.55
NR4A1P22736 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
NR4A1P22736 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
NR4A1P22736 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.51■□□□□ 0.55
NR4A1P22736 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.51■□□□□ 0.55
NR4A1P22736 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.51■□□□□ 0.55
NR4A1P22736 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.51■□□□□ 0.55
NR4A1P22736 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NR4A1P22736 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.51■□□□□ 0.55
NR4A1P22736 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.51■□□□□ 0.55
NR4A1P22736 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NR4A1P22736 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR4A1P22736 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NR4A1P22736 FZD10-202ENST00000539839 3282 ntBASIC18.5■□□□□ 0.55
NR4A1P22736 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR4A1P22736 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR4A1P22736 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
NR4A1P22736 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NR4A1P22736 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NR4A1P22736 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR4A1P22736 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR4A1P22736 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.5■□□□□ 0.55
NR4A1P22736 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.5■□□□□ 0.55
NR4A1P22736 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.5■□□□□ 0.55
NR4A1P22736 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR4A1P22736 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NR4A1P22736 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR4A1P22736 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR4A1P22736 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.5■□□□□ 0.55
NR4A1P22736 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NR4A1P22736 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR4A1P22736 AC005332.8-201ENST00000622750 2735 ntBASIC18.5■□□□□ 0.55
NR4A1P22736 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NR4A1P22736 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.49■□□□□ 0.55
NR4A1P22736 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
NR4A1P22736 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.49■□□□□ 0.55
NR4A1P22736 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NR4A1P22736 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.49■□□□□ 0.55
NR4A1P22736 KRT18P5-201ENST00000436075 1291 ntBASIC18.49■□□□□ 0.55
NR4A1P22736 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NR4A1P22736 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.49■□□□□ 0.55
NR4A1P22736 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.49■□□□□ 0.55
NR4A1P22736 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.49■□□□□ 0.55
NR4A1P22736 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.49■□□□□ 0.55
NR4A1P22736 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.49■□□□□ 0.55
NR4A1P22736 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NR4A1P22736 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR4A1P22736 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NR4A1P22736 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NR4A1P22736 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR4A1P22736 AC005082.1-201ENST00000413042 2259 ntBASIC18.48■□□□□ 0.55
NR4A1P22736 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR4A1P22736 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms