Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.69■□□□□ 0.42
MSR1P21757 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
MSR1P21757 KRT17P1-201ENST00000399211 1546 ntBASIC17.69■□□□□ 0.42
MSR1P21757 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.69■□□□□ 0.42
MSR1P21757 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
MSR1P21757 LSM12P1-201ENST00000411836 588 ntBASIC17.69■□□□□ 0.42
MSR1P21757 CROCCP5-201ENST00000436658 830 ntBASIC17.69■□□□□ 0.42
MSR1P21757 AC006970.2-201ENST00000450065 779 ntBASIC17.69■□□□□ 0.42
MSR1P21757 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.69■□□□□ 0.42
MSR1P21757 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.69■□□□□ 0.42
MSR1P21757 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.69■□□□□ 0.42
MSR1P21757 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MSR1P21757 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MSR1P21757 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
MSR1P21757 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.69■□□□□ 0.42
MSR1P21757 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 TCF3P1-201ENST00000423021 1937 ntBASIC17.68■□□□□ 0.42
MSR1P21757 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
MSR1P21757 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
MSR1P21757 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MSR1P21757 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.68■□□□□ 0.42
MSR1P21757 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.68■□□□□ 0.42
MSR1P21757 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.68■□□□□ 0.42
MSR1P21757 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.68■□□□□ 0.42
MSR1P21757 BX119927.1-201ENST00000636596 1552 ntBASIC17.68■□□□□ 0.42
MSR1P21757 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSR1P21757 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
MSR1P21757 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
MSR1P21757 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.67■□□□□ 0.42
MSR1P21757 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.67■□□□□ 0.42
MSR1P21757 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.67■□□□□ 0.42
MSR1P21757 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.67■□□□□ 0.42
MSR1P21757 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.67■□□□□ 0.42
MSR1P21757 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.67■□□□□ 0.42
MSR1P21757 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.67■□□□□ 0.42
MSR1P21757 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.67■□□□□ 0.42
MSR1P21757 C2orf69P4-201ENST00000565394 541 ntBASIC17.67■□□□□ 0.42
MSR1P21757 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.67■□□□□ 0.42
MSR1P21757 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MSR1P21757 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
MSR1P21757 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.67■□□□□ 0.42
MSR1P21757 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
MSR1P21757 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSR1P21757 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MSR1P21757 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
MSR1P21757 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MSR1P21757 PTBP1P-201ENST00000554374 1601 ntBASIC17.66■□□□□ 0.42
MSR1P21757 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MSR1P21757 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSR1P21757 PCDHAC2-203ENST00000615316 3011 ntBASIC17.66■□□□□ 0.42
MSR1P21757 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSR1P21757 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.66■□□□□ 0.42
MSR1P21757 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.66■□□□□ 0.42
MSR1P21757 AL121832.2-201ENST00000610979 668 ntBASIC17.66■□□□□ 0.42
MSR1P21757 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.66■□□□□ 0.42
MSR1P21757 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSR1P21757 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.66■□□□□ 0.42
MSR1P21757 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSR1P21757 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSR1P21757 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MSR1P21757 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.66■□□□□ 0.42
MSR1P21757 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MSR1P21757 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSR1P21757 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSR1P21757 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.65■□□□□ 0.42
MSR1P21757 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MSR1P21757 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MSR1P21757 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSR1P21757 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MSR1P21757 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.65■□□□□ 0.42
MSR1P21757 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.65■□□□□ 0.42
MSR1P21757 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms