Protein–RNA interactions for Protein: P21576

VPS1, Vacuolar protein sorting-associated protein 1, yeastyeast

Known RBP Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS1P21576 YDR048CYDR048C 315 nt0.68□□□□□ -2.3
VPS1P21576 YDR344CYDR344C 444 nt0.68□□□□□ -2.3
VPS1P21576 YPL225WYPL225W 441 nt0.68□□□□□ -2.3
VPS1P21576 DBP6YNR038W 1890 nt0.67□□□□□ -2.3
VPS1P21576 ECM12YHR021W-A 456 nt0.67□□□□□ -2.3
VPS1P21576 YMR031W-AYMR031W-A 327 nt0.67□□□□□ -2.3
VPS1P21576 YSP1YHR155W 3687 nt0.67□□□□□ -2.3
VPS1P21576 YOR011W-AYOR011W-A 207 nt0.66□□□□□ -2.3
VPS1P21576 HMRA2YCR096C 360 nt0.65□□□□□ -2.31
VPS1P21576 YNL211CYNL211C 261 nt0.65□□□□□ -2.31
VPS1P21576 IES4YOR189W 351 nt0.65□□□□□ -2.31
VPS1P21576 YOR218CYOR218C 420 nt0.65□□□□□ -2.31
VPS1P21576 YMR160WYMR160W 2451 nt0.64□□□□□ -2.31
VPS1P21576 COG8YML071C 1824 nt0.64□□□□□ -2.31
VPS1P21576 YOR282WYOR282W 321 nt0.63□□□□□ -2.31
VPS1P21576 YPR159C-AYPR159C-A 102 nt0.63□□□□□ -2.31
VPS1P21576 YPR197CYPR197C 564 nt0.63□□□□□ -2.31
VPS1P21576 LTE1YAL024C 4308 nt0.63□□□□□ -2.31
VPS1P21576 YPL044CYPL044C 549 nt0.62□□□□□ -2.31
VPS1P21576 SGF11YPL047W 300 nt0.62□□□□□ -2.31
VPS1P21576 HTL1YCR020W-B 237 nt0.61□□□□□ -2.31
VPS1P21576 HMRA1YCR097W 381 nt0.61□□□□□ -2.31
VPS1P21576 YDL185C-AYDL185C-A 228 nt0.61□□□□□ -2.31
VPS1P21576 CHS6YJL099W 2241 nt0.61□□□□□ -2.31
VPS1P21576 UTP20YBL004W 7482 nt0.61□□□□□ -2.31
VPS1P21576 YDR183C-AYDR183C-A 258 nt0.6□□□□□ -2.31
VPS1P21576 GIM4YEL003W 336 nt0.59□□□□□ -2.31
VPS1P21576 YHR063W-AYHR063W-A 336 nt0.59□□□□□ -2.31
VPS1P21576 YMR321CYMR321C 318 nt0.59□□□□□ -2.31
VPS1P21576 YDL240C-AYDL240C-A 138 nt0.57□□□□□ -2.32
VPS1P21576 YFL063WYFL063W 456 nt0.57□□□□□ -2.32
VPS1P21576 IQG1YPL242C 4488 nt0.56□□□□□ -2.32
VPS1P21576 YDR354C-AYDR354C-A 144 nt0.56□□□□□ -2.32
VPS1P21576 ATP6Q0085 780 nt0.56□□□□□ -2.32
VPS1P21576 YHL046W-AYHL046W-A 327 nt0.56□□□□□ -2.32
VPS1P21576 YJL026C-AYJL026C-A 222 nt0.56□□□□□ -2.32
VPS1P21576 NPR2YEL062W 1848 nt0.56□□□□□ -2.32
VPS1P21576 FMP27YLR454W 7887 nt0.55□□□□□ -2.32
VPS1P21576 BEM3YPL115C 3387 nt0.55□□□□□ -2.32
VPS1P21576 FYV10YIL097W 1551 nt0.55□□□□□ -2.32
VPS1P21576 YML002WYML002W 2214 nt0.55□□□□□ -2.32
VPS1P21576 snR56snR56 88 nt0.55□□□□□ -2.32
VPS1P21576 snR60snR60 104 nt0.55□□□□□ -2.32
VPS1P21576 PAA1YDR071C 576 nt0.55□□□□□ -2.32
VPS1P21576 tF(GAA)BtF(GAA)B 73 nt0.55□□□□□ -2.32
VPS1P21576 tF(GAA)FtF(GAA)F 73 nt0.55□□□□□ -2.32
VPS1P21576 tF(GAA)GtF(GAA)G 73 nt0.55□□□□□ -2.32
VPS1P21576 tF(GAA)H1tF(GAA)H1 73 nt0.55□□□□□ -2.32
VPS1P21576 tF(GAA)H2tF(GAA)H2 73 nt0.55□□□□□ -2.32
VPS1P21576 tF(GAA)MtF(GAA)M 73 nt0.55□□□□□ -2.32
VPS1P21576 tF(GAA)P1tF(GAA)P1 73 nt0.55□□□□□ -2.32
VPS1P21576 tF(GAA)P2tF(GAA)P2 73 nt0.55□□□□□ -2.32
VPS1P21576 RPS27BYHR021C 249 nt0.55□□□□□ -2.32
VPS1P21576 YOR015WYOR015W 360 nt0.55□□□□□ -2.32
VPS1P21576 VIK1YPL253C 1944 nt0.55□□□□□ -2.32
VPS1P21576 PRP5YBR237W 2550 nt0.54□□□□□ -2.32
VPS1P21576 tR(ACG)Q2tR(ACG)Q2 74 nt0.54□□□□□ -2.32
VPS1P21576 YHR175W-AYHR175W-A 150 nt0.54□□□□□ -2.32
VPS1P21576 YIL032CYIL032C 357 nt0.54□□□□□ -2.32
VPS1P21576 YAL067W-AYAL067W-A 228 nt0.54□□□□□ -2.32
VPS1P21576 YPL038W-AYPL038W-A 192 nt0.54□□□□□ -2.32
VPS1P21576 YPR160W-AYPR160W-A 81 nt0.54□□□□□ -2.32
VPS1P21576 snR36snR36 182 nt0.54□□□□□ -2.32
VPS1P21576 YFL032WYFL032W 321 nt0.53□□□□□ -2.32
VPS1P21576 RPL26BYGR034W 384 nt0.53□□□□□ -2.32
VPS1P21576 QCR9YGR183C 201 nt0.53□□□□□ -2.32
VPS1P21576 HAL9YOL089C 3093 nt0.52□□□□□ -2.33
VPS1P21576 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
VPS1P21576 YER097WYER097W 330 nt0.52□□□□□ -2.33
VPS1P21576 SEC8YPR055W 3198 nt0.52□□□□□ -2.33
VPS1P21576 MYO1YHR023W 5787 nt0.51□□□□□ -2.33
VPS1P21576 YKL145W-AYKL145W-A 93 nt0.51□□□□□ -2.33
VPS1P21576 YMR193C-AYMR193C-A 387 nt0.51□□□□□ -2.33
VPS1P21576 CSE2YNR010W 450 nt0.49□□□□□ -2.33
VPS1P21576 YOR345CYOR345C 351 nt0.49□□□□□ -2.33
VPS1P21576 ULP2YIL031W 3105 nt0.49□□□□□ -2.33
VPS1P21576 OST4YDL232W 111 nt0.48□□□□□ -2.33
VPS1P21576 YDR413CYDR413C 576 nt0.48□□□□□ -2.33
VPS1P21576 YKL118WYKL118W 312 nt0.48□□□□□ -2.33
VPS1P21576 snR190snR190 190 nt0.48□□□□□ -2.33
VPS1P21576 YOR192C-BYOR192C-B 5313 nt0.47□□□□□ -2.33
VPS1P21576 YLR120W-AYLR120W-A 102 nt0.47□□□□□ -2.33
VPS1P21576 ESP1YGR098C 4893 nt0.47□□□□□ -2.33
VPS1P21576 YGR069WYGR069W 336 nt0.46□□□□□ -2.34
VPS1P21576 tN(GUU)QtN(GUU)Q 71 nt0.46□□□□□ -2.34
VPS1P21576 YGL149WYGL149W 306 nt0.45□□□□□ -2.34
VPS1P21576 YIL134C-AYIL134C-A 204 nt0.45□□□□□ -2.34
VPS1P21576 YJL127W-AYJL127W-A 117 nt0.45□□□□□ -2.34
VPS1P21576 YLR399W-AYLR399W-A 105 nt0.45□□□□□ -2.34
VPS1P21576 STE5YDR103W 2754 nt0.45□□□□□ -2.34
VPS1P21576 YCR018C-AYCR018C-A 255 nt0.44□□□□□ -2.34
VPS1P21576 ULI1YFR026C 510 nt0.44□□□□□ -2.34
VPS1P21576 YJL197C-AYJL197C-A 282 nt0.44□□□□□ -2.34
VPS1P21576 YLL019W-AYLL019W-A 93 nt0.44□□□□□ -2.34
VPS1P21576 ABF2YMR072W 552 nt0.44□□□□□ -2.34
VPS1P21576 YMR307C-AYMR307C-A 195 nt0.44□□□□□ -2.34
VPS1P21576 COY1YKL179C 2040 nt0.43□□□□□ -2.34
VPS1P21576 PRP42YDR235W 1635 nt0.43□□□□□ -2.34
VPS1P21576 YCR022CYCR022C 345 nt0.43□□□□□ -2.34
VPS1P21576 PAU12YGR294W 363 nt0.43□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 58.6 ms