Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NFKB1P19838 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 KRT8P17-201ENST00000453110 1448 ntBASIC20.38■□□□□ 0.85
NFKB1P19838 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.38■□□□□ 0.85
NFKB1P19838 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.38■□□□□ 0.85
NFKB1P19838 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.38■□□□□ 0.85
NFKB1P19838 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NFKB1P19838 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
NFKB1P19838 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.38■□□□□ 0.85
NFKB1P19838 AL031963.3-201ENST00000606441 850 ntBASIC20.38■□□□□ 0.85
NFKB1P19838 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.38■□□□□ 0.85
NFKB1P19838 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NFKB1P19838 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NFKB1P19838 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NFKB1P19838 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.37■□□□□ 0.85
NFKB1P19838 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.37■□□□□ 0.85
NFKB1P19838 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.37■□□□□ 0.85
NFKB1P19838 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.37■□□□□ 0.85
NFKB1P19838 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NFKB1P19838 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.37■□□□□ 0.85
NFKB1P19838 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.37■□□□□ 0.85
NFKB1P19838 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.37■□□□□ 0.85
NFKB1P19838 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NFKB1P19838 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.37■□□□□ 0.85
NFKB1P19838 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.37■□□□□ 0.85
NFKB1P19838 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NFKB1P19838 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NFKB1P19838 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.36■□□□□ 0.85
NFKB1P19838 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.36■□□□□ 0.85
NFKB1P19838 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NFKB1P19838 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NFKB1P19838 GPX1P1-201ENST00000388829 606 ntBASIC20.36■□□□□ 0.85
NFKB1P19838 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.36■□□□□ 0.85
NFKB1P19838 TSPY6P-201ENST00000448518 926 ntBASIC20.36■□□□□ 0.85
NFKB1P19838 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.36■□□□□ 0.85
NFKB1P19838 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.36■□□□□ 0.85
NFKB1P19838 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.36■□□□□ 0.85
NFKB1P19838 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NFKB1P19838 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NFKB1P19838 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.35■□□□□ 0.85
NFKB1P19838 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB1P19838 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB1P19838 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.35■□□□□ 0.85
NFKB1P19838 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB1P19838 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB1P19838 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NFKB1P19838 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NFKB1P19838 SLC29A4P1-201ENST00000398760 971 ntBASIC20.35■□□□□ 0.85
NFKB1P19838 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.35■□□□□ 0.85
NFKB1P19838 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.35■□□□□ 0.85
NFKB1P19838 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.35■□□□□ 0.85
NFKB1P19838 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.35■□□□□ 0.85
NFKB1P19838 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
NFKB1P19838 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NFKB1P19838 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB1P19838 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.35■□□□□ 0.85
NFKB1P19838 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NFKB1P19838 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB1P19838 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.35■□□□□ 0.85
NFKB1P19838 KRT8P20-201ENST00000423953 1409 ntBASIC20.35■□□□□ 0.85
NFKB1P19838 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB1P19838 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NFKB1P19838 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
NFKB1P19838 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.34■□□□□ 0.85
NFKB1P19838 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NFKB1P19838 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.34■□□□□ 0.85
NFKB1P19838 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 AC090192.1-201ENST00000517740 490 ntBASIC20.34■□□□□ 0.85
NFKB1P19838 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.34■□□□□ 0.85
NFKB1P19838 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.34■□□□□ 0.85
NFKB1P19838 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.34■□□□□ 0.85
NFKB1P19838 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms