Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC245052.3-201ENST00000450182 901 ntBASIC20.86■□□□□ 0.93
VCANP13611 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
VCANP13611 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.86■□□□□ 0.93
VCANP13611 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 ANOS2P-203ENST00000472227 1816 ntBASIC20.86■□□□□ 0.93
VCANP13611 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VCANP13611 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.86■□□□□ 0.93
VCANP13611 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.86■□□□□ 0.93
VCANP13611 DGCR10-201ENST00000609839 495 ntBASIC20.86■□□□□ 0.93
VCANP13611 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.86■□□□□ 0.93
VCANP13611 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.86■□□□□ 0.93
VCANP13611 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.86■□□□□ 0.93
VCANP13611 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCANP13611 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.86■□□□□ 0.93
VCANP13611 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCANP13611 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCANP13611 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.85■□□□□ 0.93
VCANP13611 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VCANP13611 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.85■□□□□ 0.93
VCANP13611 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.85■□□□□ 0.93
VCANP13611 AC068473.5-201ENST00000616428 2072 ntBASIC20.85■□□□□ 0.93
VCANP13611 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCANP13611 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.85■□□□□ 0.93
VCANP13611 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.85■□□□□ 0.93
VCANP13611 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCANP13611 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
VCANP13611 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.85■□□□□ 0.93
VCANP13611 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCANP13611 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VCANP13611 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VCANP13611 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCANP13611 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.85■□□□□ 0.93
VCANP13611 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
VCANP13611 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCANP13611 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.84■□□□□ 0.93
VCANP13611 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCANP13611 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
VCANP13611 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCANP13611 AP002469.2-201ENST00000531724 424 ntBASIC20.84■□□□□ 0.93
VCANP13611 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.84■□□□□ 0.93
VCANP13611 NPAP1P7-201ENST00000613027 823 ntBASIC20.84■□□□□ 0.93
VCANP13611 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.84■□□□□ 0.93
VCANP13611 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCANP13611 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCANP13611 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.84■□□□□ 0.93
VCANP13611 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCANP13611 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VCANP13611 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
VCANP13611 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.84■□□□□ 0.93
VCANP13611 AC092119.3-201ENST00000612618 583 ntBASIC20.84■□□□□ 0.93
VCANP13611 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.84■□□□□ 0.93
VCANP13611 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCANP13611 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.83■□□□□ 0.93
VCANP13611 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCANP13611 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.83■□□□□ 0.93
VCANP13611 AL031008.1-201ENST00000619963 541 ntBASIC20.83■□□□□ 0.93
VCANP13611 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
VCANP13611 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCANP13611 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.83■□□□□ 0.93
VCANP13611 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
VCANP13611 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCANP13611 FSCN1P1-201ENST00000568912 1481 ntBASIC20.83■□□□□ 0.93
VCANP13611 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCANP13611 HMGA1P5-201ENST00000412453 271 ntBASIC20.83■□□□□ 0.93
VCANP13611 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.83■□□□□ 0.93
VCANP13611 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.83■□□□□ 0.93
VCANP13611 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.83■□□□□ 0.93
VCANP13611 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCANP13611 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.83■□□□□ 0.92
VCANP13611 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCANP13611 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCANP13611 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCANP13611 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.83■□□□□ 0.92
VCANP13611 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.82■□□□□ 0.92
VCANP13611 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.82■□□□□ 0.92
VCANP13611 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.82■□□□□ 0.92
VCANP13611 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VCANP13611 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.82■□□□□ 0.92
VCANP13611 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VCANP13611 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.82■□□□□ 0.92
VCANP13611 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCANP13611 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCANP13611 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.81■□□□□ 0.92
VCANP13611 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.81■□□□□ 0.92
VCANP13611 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms