Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.3■□□□□ 0.52
BMP4P12644 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP4P12644 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP4P12644 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP4P12644 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.3■□□□□ 0.52
BMP4P12644 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
BMP4P12644 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BMP4P12644 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP4P12644 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.29■□□□□ 0.52
BMP4P12644 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.29■□□□□ 0.52
BMP4P12644 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP4P12644 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.29■□□□□ 0.52
BMP4P12644 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.29■□□□□ 0.52
BMP4P12644 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.29■□□□□ 0.52
BMP4P12644 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP4P12644 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP4P12644 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP4P12644 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
BMP4P12644 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.29■□□□□ 0.52
BMP4P12644 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BMP4P12644 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
BMP4P12644 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
BMP4P12644 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.28■□□□□ 0.52
BMP4P12644 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
BMP4P12644 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.28■□□□□ 0.52
BMP4P12644 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.28■□□□□ 0.52
BMP4P12644 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.28■□□□□ 0.52
BMP4P12644 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.28■□□□□ 0.52
BMP4P12644 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 AC104187.1-201ENST00000607510 612 ntBASIC18.28■□□□□ 0.52
BMP4P12644 AC011767.1-201ENST00000617410 1153 ntBASIC18.28■□□□□ 0.52
BMP4P12644 AC073111.5-205ENST00000641717 521 ntBASIC18.28■□□□□ 0.52
BMP4P12644 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.28■□□□□ 0.52
BMP4P12644 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BMP4P12644 AC005332.7-201ENST00000614046 2005 ntBASIC18.28■□□□□ 0.52
BMP4P12644 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BMP4P12644 AC007613.1-201ENST00000572811 2597 ntBASIC18.28■□□□□ 0.52
BMP4P12644 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BMP4P12644 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.27■□□□□ 0.52
BMP4P12644 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
BMP4P12644 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
BMP4P12644 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 AC006970.2-201ENST00000450065 779 ntBASIC18.27■□□□□ 0.52
BMP4P12644 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.27■□□□□ 0.52
BMP4P12644 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.27■□□□□ 0.52
BMP4P12644 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.27■□□□□ 0.52
BMP4P12644 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.27■□□□□ 0.52
BMP4P12644 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.27■□□□□ 0.52
BMP4P12644 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 KRT18P61-201ENST00000585825 1298 ntBASIC18.27■□□□□ 0.52
BMP4P12644 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.27■□□□□ 0.52
BMP4P12644 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.27■□□□□ 0.52
BMP4P12644 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
BMP4P12644 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
BMP4P12644 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
BMP4P12644 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
BMP4P12644 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BMP4P12644 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
BMP4P12644 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.26■□□□□ 0.51
BMP4P12644 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.26■□□□□ 0.51
BMP4P12644 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BMP4P12644 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BMP4P12644 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BMP4P12644 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BMP4P12644 AC005332.8-201ENST00000622750 2735 ntBASIC18.26■□□□□ 0.51
BMP4P12644 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
BMP4P12644 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BMP4P12644 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.26■□□□□ 0.51
BMP4P12644 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms