Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TCF3P1-201ENST00000423021 1937 ntBASIC21.12■□□□□ 0.97
KRT3P12035 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT3P12035 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT3P12035 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
KRT3P12035 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT3P12035 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
KRT3P12035 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT3P12035 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT3P12035 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KRT3P12035 NCF1B-203ENST00000435988 1254 ntBASIC21.11■□□□□ 0.97
KRT3P12035 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT3P12035 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT3P12035 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT3P12035 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT3P12035 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT3P12035 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT3P12035 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT3P12035 BX119927.1-201ENST00000636596 1552 ntBASIC21.1■□□□□ 0.97
KRT3P12035 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KRT3P12035 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
KRT3P12035 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.1■□□□□ 0.97
KRT3P12035 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.1■□□□□ 0.97
KRT3P12035 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT3P12035 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KRT3P12035 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
KRT3P12035 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT3P12035 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT3P12035 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KRT3P12035 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT3P12035 MIPEPP3-201ENST00000412105 444 ntBASIC21.09■□□□□ 0.97
KRT3P12035 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.09■□□□□ 0.97
KRT3P12035 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
KRT3P12035 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
KRT3P12035 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT3P12035 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.09■□□□□ 0.97
KRT3P12035 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
KRT3P12035 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT3P12035 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 KRT8P17-201ENST00000453110 1448 ntBASIC21.09■□□□□ 0.97
KRT3P12035 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
KRT3P12035 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT3P12035 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KRT3P12035 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT3P12035 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT3P12035 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
KRT3P12035 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT3P12035 GPX1P1-201ENST00000388829 606 ntBASIC21.08■□□□□ 0.97
KRT3P12035 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT3P12035 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.08■□□□□ 0.97
KRT3P12035 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KRT3P12035 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT3P12035 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT3P12035 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT3P12035 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT3P12035 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT3P12035 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
KRT3P12035 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.07■□□□□ 0.96
KRT3P12035 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT3P12035 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.07■□□□□ 0.96
KRT3P12035 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
KRT3P12035 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT3P12035 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT3P12035 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KRT3P12035 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT3P12035 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KRT3P12035 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KRT3P12035 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
KRT3P12035 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT3P12035 AL691432.2-201ENST00000607222 2038 ntBASIC21.06■□□□□ 0.96
KRT3P12035 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms