Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.04■□□□□ 0.8
THRAP10827 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
THRAP10827 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 AC245052.3-201ENST00000450182 901 ntBASIC20.04■□□□□ 0.8
THRAP10827 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.04■□□□□ 0.8
THRAP10827 AC091874.3-201ENST00000512672 1195 ntBASIC20.04■□□□□ 0.8
THRAP10827 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.04■□□□□ 0.8
THRAP10827 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
THRAP10827 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
THRAP10827 AL512408.1-201ENST00000569378 2000 ntBASIC20.03■□□□□ 0.8
THRAP10827 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.03■□□□□ 0.8
THRAP10827 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
THRAP10827 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.03■□□□□ 0.8
THRAP10827 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
THRAP10827 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THRAP10827 AC091799.1-201ENST00000422823 811 ntBASIC20.03■□□□□ 0.8
THRAP10827 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.03■□□□□ 0.8
THRAP10827 AC097658.1-201ENST00000475555 843 ntBASIC20.03■□□□□ 0.8
THRAP10827 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.03■□□□□ 0.8
THRAP10827 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.03■□□□□ 0.8
THRAP10827 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.03■□□□□ 0.8
THRAP10827 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
THRAP10827 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
THRAP10827 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
THRAP10827 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
THRAP10827 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THRAP10827 AC112907.3-201ENST00000577781 2400 ntBASIC20.03■□□□□ 0.8
THRAP10827 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.03■□□□□ 0.8
THRAP10827 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.03■□□□□ 0.8
THRAP10827 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.02■□□□□ 0.8
THRAP10827 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
THRAP10827 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.02■□□□□ 0.8
THRAP10827 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.02■□□□□ 0.8
THRAP10827 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.02■□□□□ 0.8
THRAP10827 FAM21FP-204ENST00000608637 956 ntBASIC20.02■□□□□ 0.8
THRAP10827 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.02■□□□□ 0.8
THRAP10827 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP10827 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
THRAP10827 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.02■□□□□ 0.79
THRAP10827 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP10827 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
THRAP10827 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
THRAP10827 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.01■□□□□ 0.79
THRAP10827 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
THRAP10827 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP10827 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP10827 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP10827 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
THRAP10827 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
THRAP10827 DUSP5P2-201ENST00000426873 1033 ntBASIC20.01■□□□□ 0.79
THRAP10827 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.01■□□□□ 0.79
THRAP10827 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.01■□□□□ 0.79
THRAP10827 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP10827 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.01■□□□□ 0.79
THRAP10827 AC066615.1-201ENST00000640911 628 ntBASIC20.01■□□□□ 0.79
THRAP10827 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP10827 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.01■□□□□ 0.79
THRAP10827 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
THRAP10827 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP10827 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP10827 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP10827 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP10827 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
THRAP10827 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
THRAP10827 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20■□□□□ 0.79
THRAP10827 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20■□□□□ 0.79
THRAP10827 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP10827 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP10827 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP10827 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20■□□□□ 0.79
THRAP10827 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20■□□□□ 0.79
THRAP10827 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
THRAP10827 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
THRAP10827 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
THRAP10827 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20■□□□□ 0.79
THRAP10827 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20■□□□□ 0.79
THRAP10827 ITM2C-210ENST00000620962 501 ntBASIC20■□□□□ 0.79
THRAP10827 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms