Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 AC055733.4-201ENST00000638462 1354 ntBASIC14.88□□□□□ -0.03
SMIM17P0DL12 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 AC005224.4-201ENST00000583262 1652 ntBASIC14.88□□□□□ -0.03
SMIM17P0DL12 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 AC105233.4-201ENST00000642045 216 ntBASIC14.88□□□□□ -0.03
SMIM17P0DL12 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SMIM17P0DL12 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM17P0DL12 PKD1P5-201ENST00000532415 10291 ntBASIC14.88□□□□□ -0.03
SMIM17P0DL12 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 AC092720.2-201ENST00000602388 1665 ntBASIC14.87□□□□□ -0.03
SMIM17P0DL12 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 MIR4767-201ENST00000582827 78 ntBASIC14.87□□□□□ -0.03
SMIM17P0DL12 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMIM17P0DL12 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM17P0DL12 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 AC133561.4-201ENST00000566112 224 ntBASIC14.86□□□□□ -0.03
SMIM17P0DL12 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 AL512408.1-201ENST00000569378 2000 ntBASIC14.86□□□□□ -0.03
SMIM17P0DL12 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM17P0DL12 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM17P0DL12 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM17P0DL12 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMIM17P0DL12 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM17P0DL12 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM17P0DL12 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.85□□□□□ -0.03
SMIM17P0DL12 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMIM17P0DL12 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.85□□□□□ -0.03
SMIM17P0DL12 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM17P0DL12 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMIM17P0DL12 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMIM17P0DL12 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.85□□□□□ -0.03
SMIM17P0DL12 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
SMIM17P0DL12 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM17P0DL12 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM17P0DL12 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms