Protein–RNA interactions for Protein: P09880

TRL1, tRNA ligase, yeastyeast

Known RBP Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRL1P09880 YIL002W-AYIL002W-A 210 nt2.23□□□□□ -2.05
TRL1P09880 UFD2YDL190C 2886 nt2.23□□□□□ -2.05
TRL1P09880 PEP1YBL017C 4740 nt2.22□□□□□ -2.05
TRL1P09880 STH1YIL126W 4080 nt2.22□□□□□ -2.05
TRL1P09880 YAL067W-AYAL067W-A 228 nt2.22□□□□□ -2.05
TRL1P09880 PAN2YGL094C 3348 nt2.21□□□□□ -2.06
TRL1P09880 ALY2YJL084C 3141 nt2.21□□□□□ -2.06
TRL1P09880 YJL022WYJL022W 309 nt2.2□□□□□ -2.06
TRL1P09880 UTP8YGR128C 2142 nt2.19□□□□□ -2.06
TRL1P09880 SLX4YLR135W 2247 nt2.19□□□□□ -2.06
TRL1P09880 RGA1YOR127W 3024 nt2.19□□□□□ -2.06
TRL1P09880 YKL100W-AYKL100W-A 90 nt2.18□□□□□ -2.06
TRL1P09880 YOR019WYOR019W 2193 nt2.17□□□□□ -2.06
TRL1P09880 TMA7YLR262C-A 195 nt2.17□□□□□ -2.06
TRL1P09880 SMC4YLR086W 4257 nt2.16□□□□□ -2.06
TRL1P09880 SKI3YPR189W 4299 nt2.16□□□□□ -2.06
TRL1P09880 UBR2YLR024C 5619 nt2.16□□□□□ -2.06
TRL1P09880 USO1YDL058W 5373 nt2.16□□□□□ -2.06
TRL1P09880 TOR2YKL203C 7425 nt2.16□□□□□ -2.06
TRL1P09880 REV3YPL167C 4515 nt2.14□□□□□ -2.07
TRL1P09880 YGL123C-AYGL123C-A 231 nt2.14□□□□□ -2.07
TRL1P09880 YAR009CYAR009C 3591 nt2.14□□□□□ -2.07
TRL1P09880 COA6YMR244C-A 315 nt2.13□□□□□ -2.07
TRL1P09880 YMR272W-BYMR272W-B 108 nt2.13□□□□□ -2.07
TRL1P09880 YCL001W-BYCL001W-B 255 nt2.11□□□□□ -2.07
TRL1P09880 RTP1YMR185W 2946 nt2.11□□□□□ -2.07
TRL1P09880 TBS1YBR150C 3285 nt2.1□□□□□ -2.07
TRL1P09880 EAF1YDR359C 2949 nt2.09□□□□□ -2.07
TRL1P09880 MDS3YGL197W 4464 nt2.09□□□□□ -2.07
TRL1P09880 YER053C-AYER053C-A 114 nt2.08□□□□□ -2.08
TRL1P09880 YLL020CYLL020C 306 nt2.08□□□□□ -2.08
TRL1P09880 FAB1YFR019W 6837 nt2.08□□□□□ -2.08
TRL1P09880 CHS6YJL099W 2241 nt2.07□□□□□ -2.08
TRL1P09880 POL5YEL055C 3069 nt2.07□□□□□ -2.08
TRL1P09880 YFR012W-AYFR012W-A 87 nt2.06□□□□□ -2.08
TRL1P09880 COX5BYIL111W 456 nt2.06□□□□□ -2.08
TRL1P09880 snR14snR14 160 nt2.06□□□□□ -2.08
TRL1P09880 YGL182CYGL182C 324 nt2.05□□□□□ -2.08
TRL1P09880 MYO2YOR326W 4725 nt2.05□□□□□ -2.08
TRL1P09880 YLR422WYLR422W 5799 nt2.04□□□□□ -2.08
TRL1P09880 BFR2YDR299W 1605 nt2.04□□□□□ -2.08
TRL1P09880 BRR2YER172C 6492 nt2.04□□□□□ -2.08
TRL1P09880 BPH1YCR032W 6504 nt2.03□□□□□ -2.08
TRL1P09880 tL(UAA)QtL(UAA)Q 85 nt2.03□□□□□ -2.08
TRL1P09880 YCS4YLR272C 3531 nt2.03□□□□□ -2.09
TRL1P09880 STO1YMR125W 2586 nt2.03□□□□□ -2.09
TRL1P09880 APL3YBL037W 3078 nt2.02□□□□□ -2.09
TRL1P09880 YMR045CYMR045C 5268 nt2.02□□□□□ -2.09
TRL1P09880 YML002WYML002W 2214 nt2.02□□□□□ -2.09
TRL1P09880 CMC4YMR194C-B 222 nt2.02□□□□□ -2.09
TRL1P09880 CDC31YOR257W 486 nt2.02□□□□□ -2.09
TRL1P09880 KCS1YDR017C 3153 nt2.02□□□□□ -2.09
TRL1P09880 WAR1YML076C 2835 nt2.02□□□□□ -2.09
TRL1P09880 CFT1YDR301W 4074 nt2.01□□□□□ -2.09
TRL1P09880 YLR282CYLR282C 342 nt2.01□□□□□ -2.09
TRL1P09880 YOR161W-AYOR161W-A 81 nt2.01□□□□□ -2.09
TRL1P09880 YOR329W-AYOR329W-A 210 nt2□□□□□ -2.09
TRL1P09880 SET3YKR029C 2256 nt1.99□□□□□ -2.09
TRL1P09880 KAP122YGL016W 3246 nt1.98□□□□□ -2.09
TRL1P09880 PKH3YDR466W 2697 nt1.98□□□□□ -2.09
TRL1P09880 NOP9YJL010C 2001 nt1.98□□□□□ -2.09
TRL1P09880 BST1YFL025C 3090 nt1.97□□□□□ -2.09
TRL1P09880 CDC25YLR310C 4770 nt1.97□□□□□ -2.09
TRL1P09880 CHS1YNL192W 3396 nt1.96□□□□□ -2.1
TRL1P09880 RPL26BYGR034W 384 nt1.96□□□□□ -2.1
TRL1P09880 YBR099CYBR099C 384 nt1.96□□□□□ -2.1
TRL1P09880 YBL039C-AYBL039C-A 84 nt1.95□□□□□ -2.1
TRL1P09880 SWI4YER111C 3282 nt1.95□□□□□ -2.1
TRL1P09880 NUP145YGL092W 3954 nt1.94□□□□□ -2.1
TRL1P09880 YCR095W-AYCR095W-A 159 nt1.94□□□□□ -2.1
TRL1P09880 YBR200W-AYBR200W-A 165 nt1.94□□□□□ -2.1
TRL1P09880 YHR214C-BYHR214C-B 5382 nt1.93□□□□□ -2.1
TRL1P09880 TAH1YCR060W 336 nt1.93□□□□□ -2.1
TRL1P09880 OST4YDL232W 111 nt1.93□□□□□ -2.1
TRL1P09880 SEC21YNL287W 2808 nt1.92□□□□□ -2.1
TRL1P09880 MON2YNL297C 4911 nt1.92□□□□□ -2.1
TRL1P09880 YNL067W-BYNL067W-B 141 nt1.91□□□□□ -2.1
TRL1P09880 AZF1YOR113W 2745 nt1.91□□□□□ -2.1
TRL1P09880 GEA2YEL022W 4380 nt1.91□□□□□ -2.1
TRL1P09880 SOM1YEL059C-A 225 nt1.9□□□□□ -2.11
TRL1P09880 ROM2YLR371W 4071 nt1.9□□□□□ -2.11
TRL1P09880 snR190snR190 190 nt1.89□□□□□ -2.11
TRL1P09880 QCR9YGR183C 201 nt1.88□□□□□ -2.11
TRL1P09880 FYV10YIL097W 1551 nt1.88□□□□□ -2.11
TRL1P09880 YDR524C-AYDR524C-A 120 nt1.87□□□□□ -2.11
TRL1P09880 tM(CAU)Q2tM(CAU)Q2 78 nt1.87□□□□□ -2.11
TRL1P09880 YLR232WYLR232W 348 nt1.86□□□□□ -2.11
TRL1P09880 MEC1YBR136W 7107 nt1.86□□□□□ -2.11
TRL1P09880 CLU1YMR012W 3834 nt1.86□□□□□ -2.11
TRL1P09880 YLR041WYLR041W 321 nt1.85□□□□□ -2.11
TRL1P09880 PMP2YEL017C-A 132 nt1.84□□□□□ -2.11
TRL1P09880 STB6YKL072W 2301 nt1.84□□□□□ -2.12
TRL1P09880 SXM1YDR395W 2835 nt1.83□□□□□ -2.12
TRL1P09880 IRA1YBR140C 9279 nt1.83□□□□□ -2.12
TRL1P09880 YMR247W-AYMR247W-A 144 nt1.83□□□□□ -2.12
TRL1P09880 YBR178WYBR178W 375 nt1.83□□□□□ -2.12
TRL1P09880 SAC3YDR159W 3906 nt1.83□□□□□ -2.12
TRL1P09880 YOR093CYOR093C 4947 nt1.83□□□□□ -2.12
TRL1P09880 EST2YLR318W 2655 nt1.83□□□□□ -2.12
TRL1P09880 YLR419WYLR419W 4308 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 96.9 ms