Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.75■■□□□ 1.23
HOXC6P09630 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.75■■□□□ 1.23
HOXC6P09630 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.75■■□□□ 1.23
HOXC6P09630 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.75■■□□□ 1.23
HOXC6P09630 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.75■■□□□ 1.23
HOXC6P09630 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HOXC6P09630 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
HOXC6P09630 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HOXC6P09630 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HOXC6P09630 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
HOXC6P09630 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.74■■□□□ 1.23
HOXC6P09630 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
HOXC6P09630 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.74■■□□□ 1.23
HOXC6P09630 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.74■■□□□ 1.23
HOXC6P09630 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.74■■□□□ 1.23
HOXC6P09630 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.74■■□□□ 1.23
HOXC6P09630 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.74■■□□□ 1.23
HOXC6P09630 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
HOXC6P09630 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.74■■□□□ 1.23
HOXC6P09630 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HOXC6P09630 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HOXC6P09630 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.74■■□□□ 1.23
HOXC6P09630 AC073508.3-201ENST00000619697 1419 ntBASIC22.74■■□□□ 1.23
HOXC6P09630 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HOXC6P09630 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.73■■□□□ 1.23
HOXC6P09630 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.73■■□□□ 1.23
HOXC6P09630 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HOXC6P09630 CYP2D8P-201ENST00000433633 1490 ntBASIC22.73■■□□□ 1.23
HOXC6P09630 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
HOXC6P09630 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.73■■□□□ 1.23
HOXC6P09630 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.73■■□□□ 1.23
HOXC6P09630 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
HOXC6P09630 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
HOXC6P09630 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HOXC6P09630 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HOXC6P09630 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HOXC6P09630 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
HOXC6P09630 HLA-G-202ENST00000376815 851 ntBASIC22.73■■□□□ 1.23
HOXC6P09630 HLA-G-203ENST00000376818 1127 ntBASIC22.73■■□□□ 1.23
HOXC6P09630 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.73■■□□□ 1.23
HOXC6P09630 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.73■■□□□ 1.23
HOXC6P09630 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
HOXC6P09630 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HOXC6P09630 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.73■■□□□ 1.23
HOXC6P09630 NAPSB-206ENST00000562112 1266 ntBASIC22.73■■□□□ 1.23
HOXC6P09630 AC010947.1-201ENST00000623454 693 ntBASIC22.73■■□□□ 1.23
HOXC6P09630 KRT18P22-201ENST00000402024 1347 ntBASIC22.73■■□□□ 1.23
HOXC6P09630 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HOXC6P09630 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.73■■□□□ 1.23
HOXC6P09630 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
HOXC6P09630 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.72■■□□□ 1.23
HOXC6P09630 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.72■■□□□ 1.23
HOXC6P09630 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HOXC6P09630 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.72■■□□□ 1.23
HOXC6P09630 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.72■■□□□ 1.23
HOXC6P09630 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.72■■□□□ 1.23
HOXC6P09630 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HOXC6P09630 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HOXC6P09630 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.72■■□□□ 1.23
HOXC6P09630 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.72■■□□□ 1.23
HOXC6P09630 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.72■■□□□ 1.23
HOXC6P09630 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.72■■□□□ 1.23
HOXC6P09630 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HOXC6P09630 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HOXC6P09630 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
HOXC6P09630 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.71■■□□□ 1.23
HOXC6P09630 TERF1P1-201ENST00000311003 1181 ntBASIC22.71■■□□□ 1.23
HOXC6P09630 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.71■■□□□ 1.23
HOXC6P09630 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.71■■□□□ 1.23
HOXC6P09630 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
HOXC6P09630 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.71■■□□□ 1.23
HOXC6P09630 CR392000.1-201ENST00000624770 1228 ntBASIC22.71■■□□□ 1.23
HOXC6P09630 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.71■■□□□ 1.23
HOXC6P09630 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 KRT16P1-201ENST00000399124 1418 ntBASIC22.71■■□□□ 1.23
HOXC6P09630 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.71■■□□□ 1.23
HOXC6P09630 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
HOXC6P09630 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HOXC6P09630 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.7■■□□□ 1.23
HOXC6P09630 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
HOXC6P09630 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HOXC6P09630 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HOXC6P09630 AL390955.1-201ENST00000428694 934 ntBASIC22.7■■□□□ 1.22
HOXC6P09630 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms